Gene TK90_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0005 
Symbol 
ID8805734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp6444 
End bp6974 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003459258 
Protein GI289207192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.529145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATAT TCGTTATCGT CACGATCGTT GGCCTCGTGG GTCTGACTCT GACCATTGCC 
CGCTTGTACT CCCATCTGGC CGTTCAGGAA CGCCAGGTCG TGGGTGCCTG GGATCAACTG
GAGCGTTTGC TGGTGCAGCG CAACGGCCAT CTGCAGAAGG TTTGCATGGC TGCCGGCAGC
GGACCCTCGG CCGTTCAGCA TTTGCATCGC TCGTTGCAGC GTCAGGAGAC CGCTCGTCGC
CGGGGCGACC TGAGCACCGT TGCCAAAGCA GAGCGCGAGA TCCGCGCCCT TTGGGATTCG
CTATACCAAC AAGATATTGA TATTAAAAAA GAAAATGTAG AGGAGTCGGC GCGTCGGGTG
GTGGCTCTGG ATCAGGCCAT TCGCGACACC TTGATTCGCT ACAACGCCGC CCTGCAGATG
TATCGGCACA CCTGCCGCTC TCCCTTCTAC GCACCGATCG CCTGGCTGGG CGGAATGGGC
CGTTACACCC CCTTGCAACC CCCATCCTCG GATCCCGACA ACCCTGCCTA G
 
Protein sequence
MAIFVIVTIV GLVGLTLTIA RLYSHLAVQE RQVVGAWDQL ERLLVQRNGH LQKVCMAAGS 
GPSAVQHLHR SLQRQETARR RGDLSTVAKA EREIRALWDS LYQQDIDIKK ENVEESARRV
VALDQAIRDT LIRYNAALQM YRHTCRSPFY APIAWLGGMG RYTPLQPPSS DPDNPA