Gene Gobs_5086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGobs_5086 
Symbol 
ID8756788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeodermatophilus obscurus DSM 43160 
KingdomBacteria 
Replicon accessionNC_013757 
Strand
Start bp5312636 
End bp5313787 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content76% 
IMG OID 
Productcell wall hydrolase/autolysin 
Protein accessionYP_003411984 
Protein GI284993429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACCG ACAGCAGCAT GCAGCCCTTG GGCCCGGGGG ACCGTGGCCA TGCCGTGGCC 
GACGTGCACG CCGCCCTGCG CGCCCTCACC CTCCTGCCGG CAGCGGGGTC CGCGGAGGAG
GCGTCGCTGG ACGAGGCGGC CTACGACCCG GCCACCGAGC TCGCCGTCCG CCACTTCCAG
CAGGTGCGCG GGCTCACCGT CGACGGCCGC GTCGGCGAGG AGACCTACCG CGCCCTGTCC
GAGGCCCGCT GGTCGCTCGG CGACCGGCTG CTGCACCACG ACCCGGTCCG GCCCATGCGC
GGGGACGACG TCACCAACCT GCAGGACCGG CTGCACGAGC TCGGCTACGA CGCCGGCCCG
GTCGACGGCG TCTTCGGCCC GGAGACCGAG GCCGGGCTGC GGGCGTTCCA GCGCGACTAC
GGCCTGACCT CCGACGGCAC CTGCGGGCCG GCCACCCTCC GCGCGCTCCG TCAGCTCGGC
CGCAAGGTCA CCGGGGGGCG GCCGCAGCTG CTGCGGCAGA GCGCCAGCTT CGTCGAGAGC
GGCCCGCACC TGATCGGCCG GCGCATCGTC GTCGACCCCG GCCACGGCGG CACCGACACC
GGCTTCACCG CGGGGGAGAC CACCGAGGCC GACCTGGTGC TCGACCTCGC CTCGCGCATC
GAGGGCCGGC TCGCCGCGGC CGGCGCCACG GTCTACCTGA CCCGCGGTCG CCACCAGGAC
CCCAGTCCGA CCGAACGGAC GGCGTTCGCC AACCACGCGC GCGCCGACCT GTTCCTCTCG
CTGCACACCG ACGCGCACAG CTCCGAGCAC GCCCGCGGGG TGGCCAGCTA CTACTACGGC
ACCGGCTCGG GGGCCTCGTC GACCGTGGGG GAGCAGTTCG CCAACCTGGT GCGCCGCGAG
GTGGTGGCCC GCACCGGCAT GCTCGACCTG GGCTCCCACC CCAAGACCTG GGACCTGCTG
CGGACGAGCC GGATGCCCGC CGTCCGGCTC GACTGCGGGT ACCTGTCCCA TCCGGTCGAC
CGGCTGCTGC TGCTCGACGC CCGGCTGCGC AGCACCGTCG CCAGCGCCGT CCTCGCCGCC
GTCCAGCGGC TGTTCCTGCC CGCCGAGGCC GACCCGCCCA CCGGCACCTT CGTGCTGCCC
GGGCGCACCT GA
 
Protein sequence
MGTDSSMQPL GPGDRGHAVA DVHAALRALT LLPAAGSAEE ASLDEAAYDP ATELAVRHFQ 
QVRGLTVDGR VGEETYRALS EARWSLGDRL LHHDPVRPMR GDDVTNLQDR LHELGYDAGP
VDGVFGPETE AGLRAFQRDY GLTSDGTCGP ATLRALRQLG RKVTGGRPQL LRQSASFVES
GPHLIGRRIV VDPGHGGTDT GFTAGETTEA DLVLDLASRI EGRLAAAGAT VYLTRGRHQD
PSPTERTAFA NHARADLFLS LHTDAHSSEH ARGVASYYYG TGSGASSTVG EQFANLVRRE
VVARTGMLDL GSHPKTWDLL RTSRMPAVRL DCGYLSHPVD RLLLLDARLR STVASAVLAA
VQRLFLPAEA DPPTGTFVLP GRT