| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_5071 |
|---|
| Symbol | |
|---|
| ID | 8756773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 5293127 |
|---|
| End bp | 5295304 |
|---|
| Gene Length | 2178 bp |
|---|
| Protein Length | 725 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_003411969 |
|---|
| Protein GI | 284993414 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.404123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGCGG GCGCGTTCGT GCTGCTCGGC GTCTTCGTGG GCGTCGTGTA CGCGACGACC
GACGTGCCCG ACCCGGGCTC GGTGCAGAAC GCGCAGACGA CGGTCGTGTA CTACGCCGAC
GGCACCACCG AGATGGCCCG GCTGGGCGCG GAGAACCGCA CCAACGTGCC GCTCGCCGAG
GTCTCGGAGC CCGCGCGCGA GGCGATCCTG GCGGCCGAGA ACCGCAGCTT CTACACCGAC
CCCGGCATCT CCGCGACGGG CATCGTGCGC GCCGCGTGGA ACAACGTGAC CGGCGGCTCC
ACGCAGGGTG GCTCGACCAT CACCCAGCAG TACGTCAAGA ACGCCTTCCT GACGTCGGAG
CAGACCTTCA GCCGGAAGTT CCAGGAGCTC TTCCTCGCCG TCAAGCTCGA CAACGAGTAC
GAGAAGGACG AGATCCTCGA GAACTACCTC AACACCATCT ACTTCGGCCG TGGCGCCTAC
GGCATCGAGA CGGCGGCCAA CACCTACTTC GGTGTGCCGG CCAGCCAGCT GACCGCCCAG
CAGGGTGCGG TGCTCGCCGT CCTCGTCCGC AGCCCCTCCC GCTACGACCC GGAGTCCAAC
CCCGAGGGGG CGATGGACCG CTGGGGCCTG GTGCTCGACG CGATGGTCGG GGAGGGCTGG
CTGACCGAGC AGGAGCGGCA GGCCTCGGTG TTCCCGCCGG TGCTGCCGCG GACCGGCTCC
AACCTGGGCA TCCCCAGCGA GTCGCAGGGG CTGGTCGTCC AGCGCGTCAT CGCCGAGCTG
GAGGCCAAGG GCTACGACGA GCAGCAGATC CGGGCCGGCG GCCTGCGGAT CACCAGCACG
GTGGACAAGC GCTACCAGGA CGCCGCCGTC TCCGCGGTCT CCGAGATCAT GGACGGCCAG
CCGGAGAACC TGCGCGAGGC GCTGGTGTCC GTCGACCCGA ACACCGGTGC CGTGCGGGCC
TACTACGGCG GTCCGATCGG CGCCGGTGAC GGCGCGGTCG ACTACGCGCA GGCCCTGCGT
CAGCCCGGCT CGTCGGTCAA GCCGTACGTG CTGGCCACCG CGCTGGAGGA CGGCATCAGC
GTCAACGCCC GGCGCGACGG CTCCTCGCCG CAGGAGTTCC CCGACCGCCC GGGCCTGCCG
GTCCGCAACT CCGGCGGCGC CTCGTGCGGC TCCTGCACGC TCAGGGAGGC GCTGACCCGC
TCCCTGAACA CCACCTACTA CGGGCTGGCC TACGAGGTCG GCGCCGAGCG GGTCCGGCAG
AACATGCTCG AGGCCACCGG CCTGCCGGAG GCCTGGCCCG ACGAGCCGGC CTACGGCACG
CTCGCCGGCA GCAACACCCT GGCCGACCCG CAGACCGGCG GGACCGGCGC CTCGATCGGC
ATCGGCCAGT ACGAGATGCG CCCGATCGAC CAGGCGCACG GCTTCGCCAC CCTGGCCACC
GGTGTCGAGC ACGAGCCCTA CTTCGTCGCG CGGGTGACCG ACAGCGAGGG CGCGGTGCTG
CTGGACTACA ACGGCGACGC CGGTGACCGG GTCTTCGAGG ACGACGTGGT CAACGACGTC
ACCTATGCGA TGACCGACGT CGCCGCCTAC TCGCGGCGCT CGCTCGACGG TGGCCGCGAG
GTGGCCAGCA AGACCGGTAC GCAGGGTCAG GGCGAGGACA ACTCCGACGC GTGGATGGTC
GGCTTCACGC CGTCCGTCTC CACCGCGGTC TGGATGGGCA ACGACTCGCC CGCCCAGCCG
ATCGAGGACG TCAACGGCCG GATCATCTAC GGCTCGGGCC TGCCCGGCGC CATCTGGCAG
GAGTTTATGG ACACCGTGCT TGACGGGACG CCGGAGGAGG ACCTGCCCGA CCGGGCGCTC
ATCCGCGGTG ACACCGGCAA CGGCGTGCCC GCGCCGCAGA CCGAGACGCC GACGCAGGCA
CCGACCCAGG TCACCACCGC GCCGACGCAG CAGCCGGACC CGACACCCAC GCCGCAGCCG
ACTCCCACGC CGACCCCGAC CCCCGCGCCG CAGAACCCGC AAGGACCGCA GGGCCCGCAA
GGACCGCAGG GCCCGCAAGG ACCGCAGGGC CCGCAGAACC CGCCGGGTCC GGCCCCGGTC
CCGGTGCCGC CGGGCCCGGA GGGCACCGAG GCCGGACAGA ACGCCGAGGA CCTGGGCAAC
GGCCAGCAGA ACGGCTGA
|
|---|
| Protein sequence | MLAGAFVLLG VFVGVVYATT DVPDPGSVQN AQTTVVYYAD GTTEMARLGA ENRTNVPLAE
VSEPAREAIL AAENRSFYTD PGISATGIVR AAWNNVTGGS TQGGSTITQQ YVKNAFLTSE
QTFSRKFQEL FLAVKLDNEY EKDEILENYL NTIYFGRGAY GIETAANTYF GVPASQLTAQ
QGAVLAVLVR SPSRYDPESN PEGAMDRWGL VLDAMVGEGW LTEQERQASV FPPVLPRTGS
NLGIPSESQG LVVQRVIAEL EAKGYDEQQI RAGGLRITST VDKRYQDAAV SAVSEIMDGQ
PENLREALVS VDPNTGAVRA YYGGPIGAGD GAVDYAQALR QPGSSVKPYV LATALEDGIS
VNARRDGSSP QEFPDRPGLP VRNSGGASCG SCTLREALTR SLNTTYYGLA YEVGAERVRQ
NMLEATGLPE AWPDEPAYGT LAGSNTLADP QTGGTGASIG IGQYEMRPID QAHGFATLAT
GVEHEPYFVA RVTDSEGAVL LDYNGDAGDR VFEDDVVNDV TYAMTDVAAY SRRSLDGGRE
VASKTGTQGQ GEDNSDAWMV GFTPSVSTAV WMGNDSPAQP IEDVNGRIIY GSGLPGAIWQ
EFMDTVLDGT PEEDLPDRAL IRGDTGNGVP APQTETPTQA PTQVTTAPTQ QPDPTPTPQP
TPTPTPTPAP QNPQGPQGPQ GPQGPQGPQG PQNPPGPAPV PVPPGPEGTE AGQNAEDLGN
GQQNG
|
|---|
| |