Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_4842 |
Symbol | |
ID | 8756544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 5054047 |
End bp | 5055984 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | putative phytochrome sensor protein |
Protein accession | YP_003411747 |
Protein GI | 284993192 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGTCG TGACCCGGCC CACTCCGCCG TCCGCCGAGC CGGCCGCGGC GTCCGGCGAG CTGGCCGCCG CGGAGTACTT CGCGCTGCTG CTCGAGGAGG CCGCGGCGAT CGAGTTCGAG GGGCCGGTCG TGCGCGCCCG GACCGCCGGG GCCGACAGCG CCACGGTCGC CGGGCTGGAG CGGGTGAAGC TGCTGGCCCT GCAGGTGCGC GACGCGTTCG CCGCGCGCCG CCGCCGGGAG TCCGAGCTGG CCGCGCTGTT CGACACCGCC GGCGACCTCG CCGCGCTGCG CAGCGTCGAC GACGTGCTGA CGGCGATCGT GCGGCGGGCC CGGCAGCTGC TGGGCACCGA CGTCTCCTAC CTGACCCTGC ACGACGACGC CCGGGGCGAC ACCTACATGC GGGTGACGGA CGGCTCCGTC TCGGCCCGGT TCCAGTCGCT GCGGCTGCCG ATGGGGGCAG GCCTCGGCGG CCTGGTCGCG CAGACCGCTG CGCCGTACGC CACCGCCCGC TACTTCGCCG ACCCGCGGTT CCAGCACACC GACGACATCA ACGGCGGCGT CGCCGAGGAG GGCCTGGTCG CCATCCTCGG CGTGCCGCTG GTGCGCGGCT CGCGGGTGAT CGGGGTGCTC TTCGCCGCCG ACCGCAACGA GCGGCTCTAC GACCGCTCCG AGGTCTCGCT GCTGGGCTCG CTGGCCGCGC ACGCGGCGAT CGCGCTGGAC AACGCCCGCC TGCTCGAGGA GACCCGCACG GCGCTGGAGG AGCTCTCGAC GGCCACCCGC GAGCTGCGCG CGCACACCAC CTCGGTGGAG CGGGCCGCCG GCGCGCACGA CCGGTTCATC GACATCGTGC TGCGCGGCGG TGGCGTGGAG GACGTCGCGG CGGCGGTCAC CGAGGCGCTC GGCGGGCGGA TCACCATCCT CGACGAGCAC GGCCGCGGCA CGCCGTCCCC CGCCTCGGAC GACGACCTGC CGCCCGACCC CGCCGCCGCG CTCACGCTCG CCCGCTCGAC CGGCCGGACG GTCCGCGACG GCAGCTGGTG GACCGCGGCG GTGACCGTGG GCGCCGAGCT GCTCGGCGGC CTGGTGCTGC ACCGGGACGA CGAGCTGTCC GACTCCGACC AGCGCATCCT CGAGCGCGCC GCACTGGTGA CCTCCCTGCT GCTGCTCATC CGGCGCACCG CCAGCGAGGC CGAGAGCCGG GTGCGCGGCG AGCTGCTGGA GGAGCTGCTC GGGCCGGCCC TGCGCGACCC CGACGGGCTG CGTGAGCGCG CCCGCCGGCT GGGCGCCGAC CTCGACCGGC CGCACGCCGT CGTCGTCGTC CTGGTCGAGG AGCGCTCTCG GAGCCGGGCG CTGGCCGCCG CCACCCACCT GGCCGCCGTC CGCGGTGGGC TGGCCGGCCT GAACGACGGC CGGGTGGTGC TGTGCCTGCC GGGTCAGGAG CCCGGTGCCG CGGCGGCGCA GGTGTGCCGG GAGCTGGGCA CGGCCGTGGG CCGGCCGGTG ACCGCCGGCG GCGCCGGACC GGCGCAGGGG CCGGCCGCGG TCGCCCCCGC CCACGTCGAG GCCCAGCGCT GCGCCTCGAC GCTGGTCGCC CTCGGCCGGG CCGGCCAGGC GGCCAGCGCC GACGAGCTGG GCTTCGTCGG GCTGCTGGTC GGCGAGGGGC GGGACGTGCG CGGCTTCGTC ACCGTCACGC TCGGCCCGGT GCTGGACTAC GACGAGCGGC GCGGCACCGA CCTGGTCGGG ACGCTGCGCG CCTGGTTCGA CGCCGGCGGT TCACCGGCGC GGGCGGCCGA GGCGCTGCAG GTGCACGTCA ACACCGTGAC CCAGCGCCTG GAACGGGTGG GGCGGCTGCT CGGCCGCGGG TGGTCGGCGC CGGAGCGCGC CCTGGAGGTC CACCTGGCGC TCCGGCTGCA CCGGCTCACC GGCCCCGCCA CCGGCTGA
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Protein sequence | MPVVTRPTPP SAEPAAASGE LAAAEYFALL LEEAAAIEFE GPVVRARTAG ADSATVAGLE RVKLLALQVR DAFAARRRRE SELAALFDTA GDLAALRSVD DVLTAIVRRA RQLLGTDVSY LTLHDDARGD TYMRVTDGSV SARFQSLRLP MGAGLGGLVA QTAAPYATAR YFADPRFQHT DDINGGVAEE GLVAILGVPL VRGSRVIGVL FAADRNERLY DRSEVSLLGS LAAHAAIALD NARLLEETRT ALEELSTATR ELRAHTTSVE RAAGAHDRFI DIVLRGGGVE DVAAAVTEAL GGRITILDEH GRGTPSPASD DDLPPDPAAA LTLARSTGRT VRDGSWWTAA VTVGAELLGG LVLHRDDELS DSDQRILERA ALVTSLLLLI RRTASEAESR VRGELLEELL GPALRDPDGL RERARRLGAD LDRPHAVVVV LVEERSRSRA LAAATHLAAV RGGLAGLNDG RVVLCLPGQE PGAAAAQVCR ELGTAVGRPV TAGGAGPAQG PAAVAPAHVE AQRCASTLVA LGRAGQAASA DELGFVGLLV GEGRDVRGFV TVTLGPVLDY DERRGTDLVG TLRAWFDAGG SPARAAEALQ VHVNTVTQRL ERVGRLLGRG WSAPERALEV HLALRLHRLT GPATG
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