| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_4726 |
|---|
| Symbol | |
|---|
| ID | 8756424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 4940111 |
|---|
| End bp | 4941325 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003411641 |
|---|
| Protein GI | 284993087 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.981437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCA CCGCCGGCAA GCGCAGCACC ATGCGCCGAG GGGGCTTCCC GACCAAGGCC
GCAGCGAACC GGGCGCTGGC CGACGTCGCC AACCGCACCG CCCAAGGTGT GCGCGTCGAC
GACCGCGAGA CCGTCGCGTC CTTCCTGGCG CGCTGGTTGC AGGTGAAAGC CGGGGAGGCC
AAGCCGACCA CGGTGCGCTC CTACCGGGCG CACGTCGAGC GCGTCATCGT CCCGGCCATC
GGCCACGTCC CGATCGAAGA ACTGCGTGCC GAACACGTCG AGCAGTTGCT GGTCGACGCC
GCGAACGGCC GCGGGCCAGT GACCGTCCGG CGGATCCACG CGACGCTCCG GTCGGCGCTC
AGCTACGGCG TGAAGACCCG CCGGCTGCCG TTCAACGTCG CGAGCAACGT CACCCCGCCC
AACGGAATCC GGCCCGAGGT GCAGCCGTGG TCCGCGGCCG AGCTGGCGGC GTTCCTGCGG
CACGTCGAGA CCGACCGGCT CGGCCCGCTG TTCGAGGTCA TCGCCGCCTG CGGGCTGCGC
CGCGGTGAGG CGCTCGGTCT GCGCTGGTCG GACCTGGACC TGGCCAACCG GACCGCGCGG
ATCCGGCAGA CCATCGTCGA TGTCGGCGGC CGGCTGCAGT TCTCCACCCC GAAGACCCGC
TCATCGGAGG CGACCGTGCC GCTGACGGAG CGCGCCGTGC AGGCGCTGCT GCAGGTCCGG
CTCGGCCAGG ACCTCGATCG GCAGGGCTGG GGCGGCGCCT ACCACGCACA TGACCTGGTC
TTCGCCCGCG AGAACGGCGC CCCGCTGCGG CCGGAGTATG CGACCCGCCG CTTCGTCGCC
CTGACCAAGG CCGCGGGCCT GCGTTGGGTC CGGCTGCACG ACCTGCGCCA CGGCGCCGCG
TCGCTGATGC TCGCCGCCGG CGTCCCGATG GCGATCGTGT CGAAGGTGCT GCGGCACTCC
TCGATCGGCA TCACGGTCGA CACTTACGGC CACCTGTCCG AGGACACCGT GCGCACCGCA
TCGGACGCCA TGGCCGCCGC GCTGGAGCAG GCCTGCAAGA GCACTGCCGC CGCGGCGGGC
GACCACACTG CGACCACTGG GGGCGCCCCG GCGTCGGGTC GTCAGGACCG AAGCGCTGGT
CAGCGTGGTG GGCCCCGTGG GGATCGAACC CACAACCCGC GGATTAAAAG TCCGCTGCTC
TGCCAGTTGA GCTAG
|
|---|
| Protein sequence | MPTTAGKRST MRRGGFPTKA AANRALADVA NRTAQGVRVD DRETVASFLA RWLQVKAGEA
KPTTVRSYRA HVERVIVPAI GHVPIEELRA EHVEQLLVDA ANGRGPVTVR RIHATLRSAL
SYGVKTRRLP FNVASNVTPP NGIRPEVQPW SAAELAAFLR HVETDRLGPL FEVIAACGLR
RGEALGLRWS DLDLANRTAR IRQTIVDVGG RLQFSTPKTR SSEATVPLTE RAVQALLQVR
LGQDLDRQGW GGAYHAHDLV FARENGAPLR PEYATRRFVA LTKAAGLRWV RLHDLRHGAA
SLMLAAGVPM AIVSKVLRHS SIGITVDTYG HLSEDTVRTA SDAMAAALEQ ACKSTAAAAG
DHTATTGGAP ASGRQDRSAG QRGGPRGDRT HNPRIKSPLL CQLS
|
|---|
| |