| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_4670 |
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| Symbol | |
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| ID | 8756368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geodermatophilus obscurus DSM 43160 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013757 |
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| Strand | - |
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| Start bp | 4885984 |
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| End bp | 4889985 |
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| Gene Length | 4002 bp |
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| Protein Length | 1333 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003411589 |
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| Protein GI | 284993035 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.157839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACCC CGCCCGACGA CCTGCGCGCG CGGCTGGCCG GGCTGACCCT CGAGGACGAG
CACCGGCTGC GCCGCAGGCT CGACGGCACC CGCAAGACCC GGGACGCCGA GGCCCGGGCC
CGGCAGCGGG CGCGGATCGC CGCCGACGTC GCTGCCGCCG AGGAGCGGAT CGCCCGCCGC
CGCGCCGCCG TCCCGACGGT GCGGTACCCG GCCGAGCTGC CGGTCAGTGC CCGCCGGGAC
GACATCGCTG CGGCGCTGCG CGAGCACCAG GTGGTCGTCG TGGCCGGCGA GACCGGGTCG
GGCAAGACCA CCCAGCTGCC CAAGATCGCC CTGGAGCTGG GCCGCGGCGT GACGGGCCGG
ATCGGGCACA CCCAGCCGCG GCGGATCGCC GCCCGCACGG TGGCCGAGCG GATCGCCGAG
GAGCTGGAGA CCCCGCTGGG CGAGGTCGTC GGCTGGAAGG TGCGCTTCAC CGACCAGGTC
GGCGACTCGA CGCTGGTCAA GGTCATGACC GACGGCGTGC TGCTCGCCGA GATCGGCCGC
GACCGGCTGC TGCGCCAGTA CGACACCCTG ATCATCGACG AGGCGCACGA GCGCAGCCTC
AACGTCGACT TCCTGCTGGG CTACCTGGCC CGGCTGCTGC CCCGCCGTCC CGACCTCAAG
CTGGTCATCA CCTCGGCGAC GATCGACGTC GACCGGATCG CCAAGCACTT CACAGGACTC
GGTGAGAAGG GGCAGAGCGC AGGACTCGGC GACGATGGAC ATGGCTCGGC CGACGGCGCC
GAGGTGCCCG TCGTCGAGGT CAGCGGGCGC ACCTATCCGG TCGAGGTCCG CTACCGCCCG
GTGGTCGACC CCGACGATCC GGACGCCGAC CCGGACCGCG ACCAGGTCAC CGCCATCGCC
GACGCGGTCG AGGAGCTGGC CGCCGAGGGC CCGGGCGACG TGCTGGTCTT CCTCGCCGGC
GAGCGGGAGA TCCGCGACAC CGCCGACGTC CTGACCGAGC GGTTCCCCTC CGTGGAGGTG
CTGCCGCTCT ACTCGCGCCT GTCCGCCGCC GACCAGCACC GCGTCTTCGC CCCGCACACC
GGGCGGCGCG TCGTGCTGGC CACCAACGTC GCCGAGACGT CGCTGACCGT GCCGGGCATC
CGCTACGTCG TCGACCCCGG CACCGCGCGC ATCTCCCGCT ACAGCTCCCG GCTGAAGGTC
CAGCGGCTGC CGATCGAGCC GATCAGCCAG GCCTCGGCGC GGCAGCGCTC CGGCCGCTGC
GGGCGCACCT CCGAGGGCAT CGCCATCCGG CTCTACACCG AGGAGGACTA CGAGGGCCGG
CCGGAGTACA CCGACCCGGA GATCCTGCGC ACCAGCCTCG CCTCGGTGCT GCTCCAGATG
GCCGCCCTCG AGCTGGGCGA CGTCGCCGAC TTCCCGTTCA TCGACCCGCC GGACCGCCGG
GCGGTCGCCG ACGGCGTGGC GTTGCTCGAG GAGCTCGGCG CCCTGGGCGA GGACGGCGGC
CTCACCCCCA CCGGCCGGGC GCTGGCCACC CTGCCGCTGG ACCCGCGCAT GGCCCGGATG
GTCGTCGAGG CCGACCGGCG CGGCGTGCTG GAGGAGGTGC TGGTCATCGC TGCGGGGCTG
ACCATCCAGG ACCCGCGCGA GCGGCCCAGC GAGCACCAGC AGGCGGCCGA CACCGCACAC
GCGCGCTTCG CCGACGAGAA CTCCGACTTC CTCGCCCTGC TCAACCTGTG GCGGTACGTC
ACCGAGCAGC AGGAGGCGCT CTCCGGCAGC CAGTTCCGGC GCACCCTCAA GCGCGAGTTC
CTGCACTACC TGCGCATCCG CGAGTGGCAG GACCTCTACG GCCAGCTGCG CAGCACCGCC
CGCCGGCTGG GCATGACCAC GGGCGAGCTC GCGACCGAGC CCGACGAGCG CGGCGTCCAC
ACCGCGCTGC TCGCCGGGCT GCTCTCCCAC GTCGGCCTGC AGGTCGAGGA GGGCAAGGGC
CGGGACGGCG ACCGGCGGCG CGGCGGCCGG GAGTACCTCG GCGCCCGCAA CGCGCGCTTC
GTCCTCGCCC CCGGCACCCC GCTGGCGAAG AAGCCGCCGC GCTGGGTGGT CGCCGCCGAG
CTGGTGGAGA CCAGCCGGCT GTTCGCCCGC ACCGTCGCGC GCATCGACCC GGAGGTCGTC
GAGCGGCTGG CCGAGCACCT GGTCAAGCGG CAGTACTCCG AGCCCCGCTG GGACGCCAAG
CGGGGCTCGG TCGTCGCGAC CGAGCGGGTC ACCCTCTACG GCATCCCGCT GGTCGTCGGC
CGGCGCGTGC AGTACGGCTC GATCGACCCG GTCGTCTCCC GCGAGCTGTT CATCCGGCAC
GCCCTGGTCG AGGGCGAGTG GACGACGCAC CACCGCTTCT GGCACGACAA CCAGAAGGCG
ATGCAGCGGG TCGCGGAGCT GGAGGAGCGG GCCCGCCGCC GGGACATCCG GGTGGACGAC
GAGACCCTGT TCGAGCTCTA CGACGCGCGG ATCCCGGCCG ACGTCGTCTC CACCCGGCAC
TTCGACAGGT GGTGGAAGGC CGCCCGGCGG GGGACACCGG ACCTGCTCAC GTTCACGCCG
GAGATGCTGA CGAACGCCGC GGCGGCCGGG CAGGTGCGCG TCGAGGACTT CCCGGACGAG
GTCCCCCTGA GCCAGGGGCT CACCCTCCCG CTGTCCTACG CGTTCGCGCC GGGCGCCCCG
CAGGACGGCG TCACCGTCGA CGTCCCGCTG GCCGTGCTCG ACACCGTCGC CGAGCGGACG
TCGGGGGAGT CGCTGGCCTT CACCGTCCCC GGGCTGCGCG AGGAGCTGGT CACCGCGCTG
CTGCGCACCC TGCCCAAGCA GCTGCGCCGC GCGCTGGTGC CGATCCCCGA CCGGGTGCGG
GAGGTGCTGC CGCGCATCGC GCCGAACGAG CCGCTGCTGC CGGCGCTGGA GCGCGAGCTG
CGGCGCGCCG CAGGCGTCGT CGTCCCCCCG GACGCGTGGG CGCCGGACCA GGTGCCCGAC
CACCTGCGGG CCACGTTCCG GGTCGTCGAC GACCGGCACC GGCCGCTGGC CACCGGCAAG
GACCTGCAGG CGCTGCGCCG CGAGGTGGCG CCGCAGAGCC GGGCCAGCCT GGCCGCGGCC
GCCTCGGACG TCGAGCGCAC CGGCCAGACC GCCTGGACCT TCGGCACGCT GCCGCGCACC
GTCGAGGTCC GCCGCGGCGG ACACGTGGTC ACCGCCCACC CGGCGCTGGT CGACGAGGGG
ACGACGGTCG GCGTCCGCGT GGTCGCCACC GAGGTGGAGG CCACCCGGCT GACCTGGCGC
GGCGCCAGGC GGCTGCTGGT GCTGGTCGCC GGGTCACCCG CCCGGCAGGT GGTGAAGTCG
CTGTCGCCGA AGAGCCGCCT GGCGCTGCAG TTCAACCCGG ACGGCGAGAT CCCCGCGCTC
GTCGACGACT GCGTGGACGC CGCCGCCGAC GAGCTGCTCG CCGCCGCCGG CGGGCCGCCG
CGGAACGAGG CCGCGTTCGC CGCGCTGGTG CAGACCGCCC GCGCGCAGCT GCTGCCGCTG
ACCACCGACA CCGTGCGGCG GGTGGAGGCG GTGCTCGTGC AGGCCCGCGA GGTCGCCGTC
GCGATCGGCG CGGCGCCGGG GCGGCGGGTG CCCGAGGCGG CGGTCGCGGA CCTGCGCCGG
CAGATGGGCG GCCTGCTGCA CCGCGGCTTC GTCGCCGCGG CCGGACGGCG CCGGCTGCCG
GACCTGGTGC GCTACCTCAG GGGGATGGTG CACCGGCTGG AGAAGCTGCC CGCCAACGCC
GTGCGCGACG AGCTGTGGAT GCAGCAGGTC GCCGCGGTCA GCGCCGAATA CGAGCAGCTG
CGCGCGCAGG TGCCGTCGAC GGGGGCGCCG GACGACCCGG TCGCCCGGGT GCGCTGGATG
CTCGAGGAGC TGAGGGTGAG CCTGTTCGCC CAGACCGTCG GCACCCCGCG GCCGGTGTCG
GAGCAGCGGG TCTACAAGGC GATCGACGCG CTGACGGCCT GA
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| Protein sequence | MTTPPDDLRA RLAGLTLEDE HRLRRRLDGT RKTRDAEARA RQRARIAADV AAAEERIARR
RAAVPTVRYP AELPVSARRD DIAAALREHQ VVVVAGETGS GKTTQLPKIA LELGRGVTGR
IGHTQPRRIA ARTVAERIAE ELETPLGEVV GWKVRFTDQV GDSTLVKVMT DGVLLAEIGR
DRLLRQYDTL IIDEAHERSL NVDFLLGYLA RLLPRRPDLK LVITSATIDV DRIAKHFTGL
GEKGQSAGLG DDGHGSADGA EVPVVEVSGR TYPVEVRYRP VVDPDDPDAD PDRDQVTAIA
DAVEELAAEG PGDVLVFLAG EREIRDTADV LTERFPSVEV LPLYSRLSAA DQHRVFAPHT
GRRVVLATNV AETSLTVPGI RYVVDPGTAR ISRYSSRLKV QRLPIEPISQ ASARQRSGRC
GRTSEGIAIR LYTEEDYEGR PEYTDPEILR TSLASVLLQM AALELGDVAD FPFIDPPDRR
AVADGVALLE ELGALGEDGG LTPTGRALAT LPLDPRMARM VVEADRRGVL EEVLVIAAGL
TIQDPRERPS EHQQAADTAH ARFADENSDF LALLNLWRYV TEQQEALSGS QFRRTLKREF
LHYLRIREWQ DLYGQLRSTA RRLGMTTGEL ATEPDERGVH TALLAGLLSH VGLQVEEGKG
RDGDRRRGGR EYLGARNARF VLAPGTPLAK KPPRWVVAAE LVETSRLFAR TVARIDPEVV
ERLAEHLVKR QYSEPRWDAK RGSVVATERV TLYGIPLVVG RRVQYGSIDP VVSRELFIRH
ALVEGEWTTH HRFWHDNQKA MQRVAELEER ARRRDIRVDD ETLFELYDAR IPADVVSTRH
FDRWWKAARR GTPDLLTFTP EMLTNAAAAG QVRVEDFPDE VPLSQGLTLP LSYAFAPGAP
QDGVTVDVPL AVLDTVAERT SGESLAFTVP GLREELVTAL LRTLPKQLRR ALVPIPDRVR
EVLPRIAPNE PLLPALEREL RRAAGVVVPP DAWAPDQVPD HLRATFRVVD DRHRPLATGK
DLQALRREVA PQSRASLAAA ASDVERTGQT AWTFGTLPRT VEVRRGGHVV TAHPALVDEG
TTVGVRVVAT EVEATRLTWR GARRLLVLVA GSPARQVVKS LSPKSRLALQ FNPDGEIPAL
VDDCVDAAAD ELLAAAGGPP RNEAAFAALV QTARAQLLPL TTDTVRRVEA VLVQAREVAV
AIGAAPGRRV PEAAVADLRR QMGGLLHRGF VAAAGRRRLP DLVRYLRGMV HRLEKLPANA
VRDELWMQQV AAVSAEYEQL RAQVPSTGAP DDPVARVRWM LEELRVSLFA QTVGTPRPVS
EQRVYKAIDA LTA
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