| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_4629 |
|---|
| Symbol | |
|---|
| ID | 8756327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 4845599 |
|---|
| End bp | 4846927 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
|---|
| Protein accession | YP_003411548 |
|---|
| Protein GI | 284992994 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.267394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCTCG CCGAGCTGGC CGGGCGCCGG GTCGGGGTCT GGGGTCACGG GCGCGAGGGG
CGGGCCGCGG TGCGTGCCGC GCTGACCGCC CGCGCGGCGG GAGTCGTGGT CGTCGACGCC
GTCCCGCCGG TGGACCTGCC ACCGGGCGTG CAGGCCGGCA GCGACGTCGC CGAACTCGCC
GGCTGCGCCG TGGTGTTCCG CTCGCCGGGC ATCAGCCCCT ACCGCGAGGA CGCCCGCGCG
CTGGCCGCCC GGACCACCCT CACCTCCGGC ACCGGCGTGG CCCTGGCCGA GTTCGCCGCC
CGCGACGTGC CGACGCTCTG CGTCACGGGC ACCAAGGGCA AGAGCACCAC CAGCGCGCTG
GCCGCCGCCG TGCTGACCGC GGCCAGCCGG CCGGCGGTGC ACGCCGGCAA CATCGGCACC
CCGCTGCTCG ACGTCCTCCT CGACGACGCC GTCGCCGAGG GCACCCCGCT GGTGGTCGAG
GTGTCCAGCT ACCAGGCGGC CGCGGTCGAG GGCTGGTCCG GTTGGGGCGC GGTGACCTCG
CTGGCCCCCG AGCACCTGGA CTGGCACGGC GACGTCGAGA CGTACTACCG CGACAAGCTG
CACGTCTTCG CCGGCTGCGG GCCGGAGTCG GTCGTCGTCA GCGCGCAGGC CCGGTCGATC
GCCGAACAGC ACCTCGACCC GGCCGTGCTG GTCGACCCGG CCGAGCTCGT TCCCGAGGCG
CGGCTGGCCG GCTTCCCGCT CGAGCGGCTC TCGGGCGTGC ACAACGTCGC CAACCTGCAC
GTCGCGCTGG CCGCCTGCGT CCGGATGGGC GTGGACCTCG ACCGGTCCGC CGAGGCCGTC
CGCCGCGCCG TCGCCGGTTT CCGGGCGCTG CCGCACCGGC TCTCGCCGGT GGCCACGCGG
GACGGCGTCA CGTTCGTCGA CGACGCGCTG AGCACCACCC CGGTGTCGGT GCGCGCCGCC
ATCGACGCCT TCGCCGGGCA GCAGGTCACG CTGATCGCCG GGGGGCAGGA CCGCGGGCTG
GACTACACCG ACCTCGCCGC GGCGGTCGTC GCCCGCGGCG GGACGGTGCA GGTGCTGACG
ATCCCGGACA CCGGCGCCCG CTTCGCCGCC GACCTGCGTG CCGCCGCGGC CGCCGCCGGC
GTCGCCGCGC CGGTCACCGA GACCGGCTCC CTGGCCGACG CCGTCGCCGA GGCGCTGCGC
ACCGCCCGGC CGGGCGGTCT GGTGCTGCTC TCGCCGGGCG CCCCCAGCTA CAACCGCTTC
CGCAACTACG AGGAGTTGGC ACGGACCTAT GAGCAGATCC TCCTCGACGC CGGAGCCCAG
CGTGTCTGA
|
|---|
| Protein sequence | MRLAELAGRR VGVWGHGREG RAAVRAALTA RAAGVVVVDA VPPVDLPPGV QAGSDVAELA
GCAVVFRSPG ISPYREDARA LAARTTLTSG TGVALAEFAA RDVPTLCVTG TKGKSTTSAL
AAAVLTAASR PAVHAGNIGT PLLDVLLDDA VAEGTPLVVE VSSYQAAAVE GWSGWGAVTS
LAPEHLDWHG DVETYYRDKL HVFAGCGPES VVVSAQARSI AEQHLDPAVL VDPAELVPEA
RLAGFPLERL SGVHNVANLH VALAACVRMG VDLDRSAEAV RRAVAGFRAL PHRLSPVATR
DGVTFVDDAL STTPVSVRAA IDAFAGQQVT LIAGGQDRGL DYTDLAAAVV ARGGTVQVLT
IPDTGARFAA DLRAAAAAAG VAAPVTETGS LADAVAEALR TARPGGLVLL SPGAPSYNRF
RNYEELARTY EQILLDAGAQ RV
|
|---|
| |