Gene Gobs_4519 details

Gene Information

• Locus tag: Gobs_4519
• ID: 8756213
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: -
• Start bp: 4738225
• End bp: 4741734
• Gene Length: 3510 bp
• Protein Length: 1169 aa
• Translation table: 11
• GC content: 69%
• Product: DNA-directed RNA polymerase, beta subunit
• Protein accession: YP_003411440
• Protein GI: 284992886

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAGGCT CTCGCCCCAC CAGCATCAAC CCCCGCACCA CCGACTCCGG GCCCTACGGC 
CAGCAGTCAC AGGCACCCCA GGCCGGCCCC CGCACCGGTG AGGCCGACCA GCAGAAGATC 
CCCGGCGCGC CGCTGCGCGT CTCGTTCGCC AAGATCTCCG AGCCGCTCGA GGTGCCAGAC 
CTCCTGGCGC TGCAGACCGC GTCGTTCGAC TGGCTCATCG GCAGCCCCAC GTGGCGGGCC 
ACCCTCTCGC CGGAGGAGCA GGCCGACGCC GTGGGCGGGC TGGCCGAGAT CCTCGAGGAG 
ATTTCCCCGA TCGAGGACTT CAGTGGCTCG ATGTCGCTGT CCTTCTCCAA CCCGCGCTTC 
GAGGACGTCA AGGCGTCCCT CGAGGAGTGC AAGGACAAGG ACATGACCTA CGCGGCGCCG 
CTGTTCGTCA CCGCCGAGTT CATGAACAAC ACCACCGGTG AGATCAAGAG CCAGACGGTG 
TTCATGGGCG ACTTCCCGAT CATGACGAAC AAGGGCACGT TCGTCATCAA CGGGACCGAG 
CGCGTCGTCG TCTCGCAGCT GGTCCGCAGC CCGGGCGTCT ACTTCGACAA GACCCTGGAC 
AAGACCTCCG ACAAGGACGT CTTCAGCGCC AAGGTCATCC CCAGCCGTGG TGCGTGGCTG 
GAGTTCGACG TCGACAAGCG CGACACCGTC GGCGTCCGCA TCGACCGCAA GCGCCGGCAG 
CCGGTCACCG TGCTGCTCAA GGCGCTGGGC TGGACCGAGG ACCGGATCCG CGAGCACTTC 
CAGTGGTCGC CCACGGTGCT GGCCACCCTC GAGAAGGACC ACATCGCCGG TCAGGACGAG 
GCGCTGCTGG ACATCTACCG CAAGCTGCGG CCGGGCGAGC CGCCGACGCG GGAGAGCGCC 
CAGGCGCTGC TGGAGAACCT GTTCTTCAAC GGGAAGCGCT ACGACCTGGC CAAGGTCGGC 
CGCTACAAGG TCAACAAGAA GCTCGGCGTC GACGTGCCGC AGGCCACCCT GACGCTGACC 
GAGGACGACA TCGTCGCCAC CATCGAGTAC GTGGTGCGCC TGCACGCGGG CGAGCCCGAC 
CACGGTGTCG ACGACATCGA CCACTTCGGC AACCGTCGGC TGCGCACCGT CGGCGAGCTG 
ATCCAGAACC AGATCCGCGT CGGACTCTCC CGCATGGAGC GCGTCGTCCG CGAGCGGATG 
ACGACCCAGG ACGTCGAGGC GATCACGCCG CAGACCCTGA TCAACATCCG GCCGGTCGTC 
GCCTCCATCA AGGAGTTCTT CGGCACCAGC CAGCTGTCCC AGTTCATGGA CCAGACCAAC 
CCGCTCGCGG GCCTGACCCA CAAGCGCCGC CTGTCGGCGC TGGGCCCGGG TGGTCTGTCC 
CGTGAGCGGG CCGGCATGGA GGTCCGCGAC GTGCACCCGA GCCACTACGG CCGGATGTGC 
CCGATCGAGA CGCCGGAGGG CCCGAACATC GGTCTGATCG GCTCGCTGTC GGCCTACGGG 
CGGGTCAACG CCTTCGGCTT CATCGAGACC CCGTACCGCC GGGTCCAGAA CGGTGTCGTC 
ACCGACACGA TCGACTACCT GACCGCCGAC GAGGAGGACC GCTTCGTCGT CGCCCAGGCC 
AACTCGCCGC TGGACGCCCA GGGCCGGTTC GCCGAGGACC GCGTCCTGGT CCGCACCAAG 
GGCGGTGAGG TCGACTACCT CGTCCCGGAG AACGTCGACT ACATGGACGT CTCGCCGCGG 
CAGATGACCT CGGTCGCGAC GGCGATGATC CCGTTCCTCG AGCACGACGA CGCCAACCGC 
GCGCTCATGG GCGCGAACAT GCAGCGTCAG GCCGTCCCCC TGCTGCGCAG CGAGGCGCCG 
CTGGTCGGCA CCGGTATGGA GCTGCGTGCC GCCGTCGACG CAGGCGACGT CGTCGTGGCG 
GAGAAGGCCG GTGTGGTCGA GGACTCCACC GCCGACTACG TCACCGTCAT GGCCGACGAC 
GGCACCCGGC AGACCTACCG GCTGCTGAAG TTCCGCCGCT CGAACCAGGG CACCTCGATC 
AACCAGACTC CCGTCGTCGA CGAGGGGCAG CGGGTCGAGG TCGGCCAGGT CATCGCCGAC 
GGGCCGTGCA CCGACGAGGG CGAGATGGCG CTGGGCAAGA ACCTGCTCGT CGCCTTCATG 
CCGTGGGAGG GCCACAACTA CGAGGACGCG ATCATCCTGT CGCAGCGCCT CGTGCAGGAC 
GACGTCCTGT CCTCGATCCA CATCGAGGAG TTCGAGGTCG ACGCGCGTGA CACCAAGCTC 
GGTGCCGAGG AGATCACCCG GGACATCCCG AACGTCTCCG AGGAGGTCCT CGCCGACCTC 
GACGAGCGCG GCATCATCCG CATCGGCGCC GAGGTCGTGC CCGGCGACAT CCTCGTCGGC 
AAGGTCACGC CCAAGGGCGA GACCGAGCTG ACCCCCGAGG AGCGGCTGCT GCGGGCGATC 
TTCGGTGAGA AGGCCCGTGA GGTCCGCGAC ACCAGCCTCA AGGTCAAGCA CGGTGAGTCC 
GGCAAGGTGA TCGGCGTCCG CGTGTTCTCC CGCGAGGACG GCGACGAGCT GCCCGCCGGC 
GTCAACGAGC TGATCCGGGT CTACGTCGCC CAGATGCGCA AGATCTCCGA CGGCGACAAG 
CTCGCCGGGC GCCACGGCAA CAAGGGCGTC ATCGCGAAGA TCCTGCCGCA GGAGGACATG 
CCGTTCCTCG AGGACGGCAC CCCGGTGGAC ATCGTGCTGA ACCCGCTGGG CGTCCCCGGC 
CGGATGAACG TCGGCCAGGT CCTGGAGACC CACCTCGGGT GGGTCGCCAA GTCCGGCTGG 
CAGGTCGAGG GCACCCCGGA GTGGGCGGTC AACCTCCCCG ACCCCGCGCG TGCCGCCGGC 
CCGGGCACCC GGACGGCGAC GCCGGTGTTC GACGGCGCCC GCGAGGAGGA GATCGTCGGC 
CTGCTCGGCT CGACGATCCC GAACCGCGAC GGCAACCGGA TGGTGCAGCC CACCGGCAAG 
GCGCGGCTGT TCGACGGCCG CTCCGGGGAG CCCTTCCCCG AGGCGATCTC GGTCGGCTAC 
GTCTACATCC TGAAGCTGCT GCACCTGGTC GACGACAAGA TCCACGCCCG GTCGACCGGC 
CCGTACTCGA TGATCACTCA GCAGCCGCTG GGTGGTAAGG CACAGTTCGG TGGCCAGCGC 
TTCGGTGAGA TGGAGTGCTG GGCGATGCAG GCCTACGGCG CGGCCTACGC GCTGCAGGAG 
CTGCTCACCA TCAAGTCCGA CGACATCCTC GGCCGCGTCA AGGTGTACGA GGCGATCGTC 
AAGGGCGAGA ACATCCCCGA GCCGGGCATC CCGGAGTCGT TCAAGGTGTT GCTCAAGGAG 
CTGCAGTCGC TCTGCCTGAA CGTGGAGGTC CTCTCCGGCG ACGGCCAGGC GATCGAGCTG 
CGCGACACCG ACGACGAGGT CTTCCGGGCC GCGGAGGAGC TGGGCATCGA CCTGTCCCGC 
CGCGAGCCGT CGTCCGTCGA GGACGTGTGA 

 

Protein sequence

MAGSRPTSIN PRTTDSGPYG QQSQAPQAGP RTGEADQQKI PGAPLRVSFA KISEPLEVPD 
LLALQTASFD WLIGSPTWRA TLSPEEQADA VGGLAEILEE ISPIEDFSGS MSLSFSNPRF 
EDVKASLEEC KDKDMTYAAP LFVTAEFMNN TTGEIKSQTV FMGDFPIMTN KGTFVINGTE 
RVVVSQLVRS PGVYFDKTLD KTSDKDVFSA KVIPSRGAWL EFDVDKRDTV GVRIDRKRRQ 
PVTVLLKALG WTEDRIREHF QWSPTVLATL EKDHIAGQDE ALLDIYRKLR PGEPPTRESA 
QALLENLFFN GKRYDLAKVG RYKVNKKLGV DVPQATLTLT EDDIVATIEY VVRLHAGEPD 
HGVDDIDHFG NRRLRTVGEL IQNQIRVGLS RMERVVRERM TTQDVEAITP QTLINIRPVV 
ASIKEFFGTS QLSQFMDQTN PLAGLTHKRR LSALGPGGLS RERAGMEVRD VHPSHYGRMC 
PIETPEGPNI GLIGSLSAYG RVNAFGFIET PYRRVQNGVV TDTIDYLTAD EEDRFVVAQA 
NSPLDAQGRF AEDRVLVRTK GGEVDYLVPE NVDYMDVSPR QMTSVATAMI PFLEHDDANR 
ALMGANMQRQ AVPLLRSEAP LVGTGMELRA AVDAGDVVVA EKAGVVEDST ADYVTVMADD 
GTRQTYRLLK FRRSNQGTSI NQTPVVDEGQ RVEVGQVIAD GPCTDEGEMA LGKNLLVAFM 
PWEGHNYEDA IILSQRLVQD DVLSSIHIEE FEVDARDTKL GAEEITRDIP NVSEEVLADL 
DERGIIRIGA EVVPGDILVG KVTPKGETEL TPEERLLRAI FGEKAREVRD TSLKVKHGES 
GKVIGVRVFS REDGDELPAG VNELIRVYVA QMRKISDGDK LAGRHGNKGV IAKILPQEDM 
PFLEDGTPVD IVLNPLGVPG RMNVGQVLET HLGWVAKSGW QVEGTPEWAV NLPDPARAAG 
PGTRTATPVF DGAREEEIVG LLGSTIPNRD GNRMVQPTGK ARLFDGRSGE PFPEAISVGY 
VYILKLLHLV DDKIHARSTG PYSMITQQPL GGKAQFGGQR FGEMECWAMQ AYGAAYALQE 
LLTIKSDDIL GRVKVYEAIV KGENIPEPGI PESFKVLLKE LQSLCLNVEV LSGDGQAIEL 
RDTDDEVFRA AEELGIDLSR REPSSVEDV