| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_4476 |
|---|
| Symbol | |
|---|
| ID | 8756170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 4707104 |
|---|
| End bp | 4707952 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_003411397 |
|---|
| Protein GI | 284992843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGACCACCC CCAGCACTGC TGACGAGCCC GCCACCGCAC CCGGTGGCGG GCTCGTCCGT
CTCCGGTTGG GGATCGCCTA CGACGGCACC GCGCTGCACG GCTGGGCCCG TCAGCCGGCG
CAGCGGACGG TGCAGGGCGA CCTCGAGGAG GCCCTGAGCC GGGTGCTGCG GCAGCCGGTC
TCGCTGACCG TGGCCGGACG CACGGACGCC GGGGTGCACG CCACCGGCCA GGTCGCGCAC
GGCGACGTCC CCCGTGCCGT GTGGGCGGAA CAGCGGCCCC GGCTGGTGCG CCGGCTGCGC
GGTGTGCTGC CGCCCGACAT CGCCGTCCAC ACGGTCGAGG AGGCGCCGCG GGACTTCGAC
GCCCGCTTCG GGGCGCTGCG CCGGCACTAC GTCTACCGGC TCACCGATGC CGACAGCGGT
CCGCCGCCGC TGCGCCGCGC CGACACGGTC GGCTGGCCCC GGCGGCTGGA CGCCGACGCG
ATGGCGGTCG CCGCAGAACT CCTGCTGGGC CTGCACGACT TCGCCGCCTT CTGCCGGCGG
CGGGAGGGCG CGACGACGAT CCGCACGCTG CTGACCCTGG CGGTGACCCG CGAGGGCGAC
CTGGTGACCG TCCGGGCCTC CGCGGACGCC TTCTGCCACT CGATGGTGCG CAGCCTCGTC
GGCGCCCTCA CGGCGGTGGG GGAGGGCCGT CGTCCGCCGG AGTGGCCGGC GGCGCTGCTG
ACGAGCACGG AGCGCTCCAG CGAGGTGCCC GTCGTCCCGC CCGGCGGGCT GACCCTGGTG
GGGGTCGACT ACCCACCGGA CGACGAGCTG GCGGCCCGCG CGGTGCTCAC CCGGGGCCTC
CGCTCCTGA
|
|---|
| Protein sequence | MTTPSTADEP ATAPGGGLVR LRLGIAYDGT ALHGWARQPA QRTVQGDLEE ALSRVLRQPV
SLTVAGRTDA GVHATGQVAH GDVPRAVWAE QRPRLVRRLR GVLPPDIAVH TVEEAPRDFD
ARFGALRRHY VYRLTDADSG PPPLRRADTV GWPRRLDADA MAVAAELLLG LHDFAAFCRR
REGATTIRTL LTLAVTREGD LVTVRASADA FCHSMVRSLV GALTAVGEGR RPPEWPAALL
TSTERSSEVP VVPPGGLTLV GVDYPPDDEL AARAVLTRGL RS
|
|---|
| |