| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_4413 |
|---|
| Symbol | |
|---|
| ID | 8756107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 4647564 |
|---|
| End bp | 4648778 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | isocitrate dehydrogenase, NADP-dependent |
|---|
| Protein accession | YP_003411338 |
|---|
| Protein GI | 284992784 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAGA TCAAGGTCGA GGGCACCGTC GTCGAGCTCG ACGGCGACGA GATGACCCGG
ATCATCTGGC AGTTCATCAA GGACCAGCTG ATCCTCCCGT ACCTCGACGT CGACCTCGAG
TACTACGACC TGGGCATCGA GAAGCGCGAC GAGACCGACG ACCAGATCAC CGTCGACGCG
GCCGAGGCCA TCAAGCGCCA CGGCGTCGGC GTCAAGTGCG CGACGATCAC TCCTGACGAG
GCCCGCGTCG AGGAGTTCGG TCTCAAGAAG ATGTGGCGGT CCCCGAACGG GACGATCCGC
AACATCCTCG GCGGTGTGAT CTTCCGCGAG CCGATCATCA TGCAGAACGT GCCGCGGCTG
GTGCCGGGCT GGACCAAGCC GATCGTCGTC GGCCGTCACG CCTTCGGTGA CCAGTACCGG
GCCACGGACT TCAGGTTCCC CGGTGAGGGC ACGCTGACGA TCACCTTCCA GCCCAAGGAC
GGCGGCGAGC CGATCCAGCA CGAGGTGTTC CAGTCCCCCG GCGGGGGCGT CGCGATGGCG
ATGTACAACC TCGACGAGTC GATCCGCGAC TTCGCCCGGG CCTCGATGAA CTACGGCCTG
CAGCGCGGCT ACCCGGTCTA CCTCTCGACC AAGAACACGA TCCTCAAGGC CTACGACGGG
CGGTTCAAGG ACCTGTTCGC CGAGGTCTTC GAGTCCGAGT TCAAGGACCA GTTCGAGCAG
GCCGGGATCA CCTACGAGCA CCGGCTCATC GACGACATGG TGGCGGCGTC CCTCAAGTGG
GAGGGCGGTT ACGTCTGGGC CTGCAAGAAC TACGACGGCG ATGTCCAGTC CGACACCGTG
GCCCAGGGCT TCGGCTCGCT GGGCCTGATG ACCTCGGTGC TGATGAGCCC CGACGGCCGC
ACCGTCGAGG CCGAGGCCGC CCACGGCACG GTGACCCGGC ACTTCCGGCA GCACCAGCAG
GGCAAGGAGA CCTCGACCAA CCCGATCGCG TCGATCTTCG CCTGGACCCG GGGCCTGGCC
CACCGCGGCA AGCTTGACAA CACGCCCGAG GTGACCCGCT TCGCGGAGAC CCTGGAGAAG
GTCTGCATCG ACACCGTCGA GAGCGGCCAG ATGACCAAGG ACCTCGCCCT GCTGATCAGC
AAGGACCAGC CGTGGCTCTC CACCCAGGAC TTCCTGGCGG CCATCGACGG GAACCTGCAG
AAGGCCATGG CCTGA
|
|---|
| Protein sequence | MSKIKVEGTV VELDGDEMTR IIWQFIKDQL ILPYLDVDLE YYDLGIEKRD ETDDQITVDA
AEAIKRHGVG VKCATITPDE ARVEEFGLKK MWRSPNGTIR NILGGVIFRE PIIMQNVPRL
VPGWTKPIVV GRHAFGDQYR ATDFRFPGEG TLTITFQPKD GGEPIQHEVF QSPGGGVAMA
MYNLDESIRD FARASMNYGL QRGYPVYLST KNTILKAYDG RFKDLFAEVF ESEFKDQFEQ
AGITYEHRLI DDMVAASLKW EGGYVWACKN YDGDVQSDTV AQGFGSLGLM TSVLMSPDGR
TVEAEAAHGT VTRHFRQHQQ GKETSTNPIA SIFAWTRGLA HRGKLDNTPE VTRFAETLEK
VCIDTVESGQ MTKDLALLIS KDQPWLSTQD FLAAIDGNLQ KAMA
|
|---|
| |