Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_4277 |
Symbol | |
ID | 8755971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 4493115 |
End bp | 4496342 |
Gene Length | 3228 bp |
Protein Length | 1075 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | preprotein translocase, SecA subunit |
Protein accession | YP_003411210 |
Protein GI | 284992656 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.259413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCTCGA AGATCCTCCG AGCCGGTGAG GGCAAGATCC TCCGACGACT GAACAAGATC GCCGACGCGG TCGAGTCGCT GGCGGAGGAA ACTGCCGACC TCACCGACCC GGAGCTGCGC GCCAGGACCG ACGAGTTCAA GGAGCGCCTG GCGGAGGGGG AGACCCTCGA CCAGCTCCTG CCGGAGGCCT TCGCCGTCGT CCGCGAGGCC GCTACCCGCA CCCTCGGTCA GCGGCACTTC CGCGTGCAGG TCATGGGCGG CGCCGCGCTG CACCTGGGCA ACATCGCCGA GATGCGCACC GGTGAGGGCA AGACGCTGAC CGGCGTCCTG CCCGCCTACC TCAACGCGCT CACCGACCAG GGCGTGCACG TGGTCACGGT GAACGACTAC CTGGCCAAGC GCGACGCGGA GTGGATGGGC CGGGTGCACC GCTTCCTCGG CCTCTCCGTC GGCGTGATCC TCTCCGGCGA GCGCCCGGCG CAGCGCCGCG AGCAGTACGC CTGCGACATC ACCTACGGCA CGAACAACGA GTTCGGCTTC GACTACCTGC GCGACAACAT GGCGTGGAAC AAGTCCGACC TCGTGCAGCG CGGGCACCAC TTCGCCGTCG TCGACGAGGT CGACTCGATC CTCATCGACG AGGCCCGCAC GCCGCTGATC ATCAGCGGCC CGGCCGGCGA CCCGGCGATG CACCGCTGGT ACACCGAGTT CGCGCGGCTG GCCCCGATGA TGCAGCGCGA CGTCCACTAC GAGGTGGAGG AGGGCAAGCG CACGGTCGCC ATCACCGAGG AGGGCGTGGA GTTCGTCGAG GACCAGATCG GCATCGAGAA CCTCTACGAG GCGGCCAACA CCCCGCTGAT CAGCTTCCTG AACAACGCGC TCAAGGCCAA GGAGCTCTAC CACCGCGACC AGCAGTACAT CGTCAGCAAC GGCGAGGTGC TCATCGTCGA CGAGTTCACC GGCCGCGTGC TGTCGGGCCG GCGCTACAAC GAGGGCATGC ACCAGGCCAT CGAGGCCAAG GAGCGGGTGC AGATCAAGGA CGAGAACCAG ACCCTCGCCA CGATCACCCT GCAGAACTAC TTCCGGCTCT ACGAGAAGCT GTCCGGGATG ACGGGCACCG CCCAGACCGA GGCCGCCGAG CTCTCGCAGA CCTACGGGCT GGGCGTCGTC CCGATCCCCA CCAACCGGCC GATGGTCCGC GAGGACCGCT CCGACGTCAT CTACAAGACC GAGCAGGCCA AGTTCGACGC CGTCATCGAC GACATCGCCG AGCGGCACGA GGCCGGGCAG CCGGTGCTGG TCGGCACGGC CAGCGTCGAG AAGTCCGAGC TGCTGTCCAG GCTGCTGCTG CAGCGCGGCA TCAAGCACGA GGTGCTCAAC GCGAAGAACC ACGCGCGCGA GGCGCACATC GTGGCCCAGG CCGGCCGGCT GGGCGCGGTC ACGGTGGCCA CCAACATGGC CGGCCGCGGC ACCGACATCC AGCTCGGCGG CAGCCCCGAC TTCATCGCCG ACGAGGCGCT GCGCGCCCGC GGCCTGTCCC CGGCGGAGAC GCCGGAGGAG TACGAGGCGG CCTGGGACAG CGCGCTGGAG AAGGCCAGGG ACCAGGTCAA GGCCGAGCAC GAGGAGGTCA CCGCGGTCGG CGGCCTCTAC GTGCTGGGCA CCGAGCGGCA CGAGAGCCGG CGCATCGACA ACCAGCTGCG CGGCCGCTCG GGCCGCCAGG GCGACCCGGG TGAGTCCCGG TTCTACCTGT CGCTGGGCGA CGACCTCATG CGGCGGTTCA ACGGCCCGAT GCTCGAGTCG ATGATGACCA CGCTGCGGGT CCCCGATGAC CAGCCGATCG AGTCGAAGAT GGTCAGCCGG GCGATCCTCT CGGCACAGAC CCAGGTCGAG CAGCAGAACT TCGAGGTCCG CAAGGACGTC CTGAAGTACG ACGAGGTGCT CAACCGCCAG CGCACCGTCA TCTACGCCGA GCGGCGCAAG GTGCTCGACG GCCAGGACCT GCACGTGCAG GTCCGTTCGA TGGTCGACGA GGTCGTCAGC GCCTACGTCG ACGGGGCGAC CGAGATGGGT TACGCCGAGG ACTGGGACCT CGAGCAGCTG TGGACCGGCC TCAAGGCCCT CTACCCGGTG GGCCTGGACC GCGACGAGCT GATCGACCGG GTGGGCGACG GCGACCAGGC GGCGCTGACC GCCGACGTCC TCAAGAGCGA GCTGCTCGAC GACGTCCACC GGGCCTACGA GGAGCGCGAG GCCACCCTCG GCGCGGAGGT CATGCGCGAG CTGGAGCGCC GGGTGCTGCT GTCGGTGCTC GACCGCAAGT GGCGCGAGCA CCTCTACGAG ATGGACTACC TGCGGGCCGG CATCCACCTG CGCGCGATGG CCAACCGCGA CCCGGTCGTG GAGTACCAGC GCGAGGGCTA CGACATGTTC GTGTCGATGC TCGACGGCAT CAAGGAGGAG TCGGTCGGCT TCCTGTTTAA CCTGGAGGTC AAGACCAAGG AGCAGCAGGA CGCCGAGGCC CGCGCCAAGC AGGCCGAGGC CGAGGCCAAG GCGCTGGCCG TGGCACAGCA GGGGACGGCG CGGGTGCGGG CCCGGCAGGC GGCGGCCGCG CAGGCCGCGG CGGCGCAGGC GGCCGCGGCG GCTCCGGCTC CCGCTGCCCC GGCTCCGGCT CCCGCTGCCC CGGCTCCCGC CGCCCCGGCC GCGGCACCGC CGGCTCGACA GGCCCTCGCC GAGCCGGACC TCGCCGAGTC GGCTCCTGCT GCGCCCGCTC CCGCGCCGGC GCAGCCGGCC CCGGCGCCCG TCGAGCCGGC TCCCGCCGTG GCCCAGGCGA CTGCGGCGCC GGTCGAGGTG GTCCCGGCGC CGGTCGAGGG CGACGGCGTC GCGCCGGCCG CCGAGCCCGT CCCGGCGGCC CGTCGCACGG GGACGGCCCG GCGCGGTCGG CACGCCGCGC CGGAGGACGT CGCCCCGGCA GCACCCGAGG TCGAGGAGCC GGTGTCCTCG GGCACCGGTC CGGAGCTGTC GGTGAAGGGT CTCGACGACC CGCACCGCAG CGACCAGCTC AGCTACTCGG CGCCTGGCCT GGACGCCTCG CCGCGGGAGA GCGGGCGGGT CAAGGCGGCG AAGAGCGCGA CCGTGACCGG CACCAAGGAG CCGGCCCGGA ACGCGCCCTG CCCCTGCGGC TCGGGCAAGA AGTACAAGGT CTGCCACGGA GCGCCCTCGC GCGCCTGA
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Protein sequence | MFSKILRAGE GKILRRLNKI ADAVESLAEE TADLTDPELR ARTDEFKERL AEGETLDQLL PEAFAVVREA ATRTLGQRHF RVQVMGGAAL HLGNIAEMRT GEGKTLTGVL PAYLNALTDQ GVHVVTVNDY LAKRDAEWMG RVHRFLGLSV GVILSGERPA QRREQYACDI TYGTNNEFGF DYLRDNMAWN KSDLVQRGHH FAVVDEVDSI LIDEARTPLI ISGPAGDPAM HRWYTEFARL APMMQRDVHY EVEEGKRTVA ITEEGVEFVE DQIGIENLYE AANTPLISFL NNALKAKELY HRDQQYIVSN GEVLIVDEFT GRVLSGRRYN EGMHQAIEAK ERVQIKDENQ TLATITLQNY FRLYEKLSGM TGTAQTEAAE LSQTYGLGVV PIPTNRPMVR EDRSDVIYKT EQAKFDAVID DIAERHEAGQ PVLVGTASVE KSELLSRLLL QRGIKHEVLN AKNHAREAHI VAQAGRLGAV TVATNMAGRG TDIQLGGSPD FIADEALRAR GLSPAETPEE YEAAWDSALE KARDQVKAEH EEVTAVGGLY VLGTERHESR RIDNQLRGRS GRQGDPGESR FYLSLGDDLM RRFNGPMLES MMTTLRVPDD QPIESKMVSR AILSAQTQVE QQNFEVRKDV LKYDEVLNRQ RTVIYAERRK VLDGQDLHVQ VRSMVDEVVS AYVDGATEMG YAEDWDLEQL WTGLKALYPV GLDRDELIDR VGDGDQAALT ADVLKSELLD DVHRAYEERE ATLGAEVMRE LERRVLLSVL DRKWREHLYE MDYLRAGIHL RAMANRDPVV EYQREGYDMF VSMLDGIKEE SVGFLFNLEV KTKEQQDAEA RAKQAEAEAK ALAVAQQGTA RVRARQAAAA QAAAAQAAAA APAPAAPAPA PAAPAPAAPA AAPPARQALA EPDLAESAPA APAPAPAQPA PAPVEPAPAV AQATAAPVEV VPAPVEGDGV APAAEPVPAA RRTGTARRGR HAAPEDVAPA APEVEEPVSS GTGPELSVKG LDDPHRSDQL SYSAPGLDAS PRESGRVKAA KSATVTGTKE PARNAPCPCG SGKKYKVCHG APSRA
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