| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_4244 |
|---|
| Symbol | |
|---|
| ID | 8755938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 4459859 |
|---|
| End bp | 4463047 |
|---|
| Gene Length | 3189 bp |
|---|
| Protein Length | 1062 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_003411177 |
|---|
| Protein GI | 284992623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.664691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCACTTC GGGGGGACGA GTCGACGCCG GTCTACTGCC TCGTGCAGCC GGCCGTGGCG
TCGGTGCCCC GGCCTCGGCT CGACCCCACC CAGCAGGCCG TCGTCGACCA TCCGGGCGGC
CCGCTGCTGG TGCTCGCCGG CCCCGGCACG GGCAAGACGA CGACGATCGT CGAGGCGGTC
GCCGCGCGGA TCGACGGCGG CGTCGACCCC GAGCAGATCC TCGTCCTGAC CTTCAGCCGC
CGGGCCGCGG CCGAGCTGCG CGACCGCGTC GCCGCGCGGG TGGCGCGCAC CATCCGTGAG
CCGCTGGCCC GCACCTTCCA CTCCTACGCC TACGGCGTGT TGCGGCGGGC GGCGCTGCTG
CGCGGGGAGG CGCCCCCGCG GCTGCTCACC GCCGCCGAGC AGGACGCCCT CGTCGCCGAG
CTGCTGCGCG GTGACCTGGC CGGGGAGGGC GCGGTGCGCT GGCCGGAGTC GCTGCTGCCG
GCGCTGACCA CCGCCGGTTT CCGCGGCGAA CTGCGCGAGC TGCTGCTGCG GGCCACCGAG
CGGGGGGTCG ACGCGGAGCT GCTGGCCGCC TGGAGCCGGG AGACCGGCAA CGAGGCGTGG
TTGCACGCCG CGGCCTTCCA GGAGCAGTAC GAGGCGGTCA CCGCCTTCTC CACCGCCGGC
GGCGGTGACG CGTCGGGTTA CGACCCCGCC GAGCTGGTCC GGGCCGCGAT CGCCGAGCTC
GAGGACGACC CGGCGCTGCT GCGCGCCGAG CGGGAGCGGG CGCGCTGGCT GTTCGTCGAC
GAGTACCAGG ACACCGACCC GGCGCAGGTC GAGCTGCTGC AGCTGCTCGC CGGCGGCGGG
GGCGACCTGG TCGTCGTGGG CGACCCCGAC CAGGCCGTCT ACACCTTCCG CGGCGCCGAG
CCGCGCGGCA TCGTCGAGTT CCCCGAGCGG TTCCGCACCG TGAGCGGCCG ACCCGCACCG
CGGCTGTCGC TGGGCGTGTG CCGGCGCTCG GGCCCCGCGT TGCTGGATGT CAGCCGGAGG
GTCGCCGAGG CACTGCCCGG TCCGTGGGAG CACCGCAGGC TGGCCGCTGT CGAGGGCGCC
GAGGAGGGCG CCGCCGAGGT GCACGTGTTC GGCTCGGCAT CGGTCGAGGC CGCCTACGTC
GCCGACACCC TGCGCCGCGC GCACCTGGTC GACGGCGTCC CGTGGTCGGG GATGGCCGTC
GTCGTGCGCA CCGCGCTGGC CATCGGGCCG CTGCGGCGCG CGCTCACCTC GGCCGGCGTC
CCGGTCGAGG TGGGCACCGA CGACCTGCCG CTCGCCGCCC AGCCGGCCGT CGCGCCGCTG
CTGGCCGCGC TCGGCGCGCT GCTGCCGCGG CCGGGCGCCG AGCCGGGCAC CCTGGCCCTC
GACGAGCCCG GCGCCGAGGC GCTGCTGACC TCCGCGCTGG GCGGCGCGAC CGTGCTGGAC
CTGCGCCGGC TGCGCCGTGC CGTGCGGATC GCGCAGGCCC GGCGCGGGGT CGACGCCGAC
GAGCGGGGCG CGCCGCTGGC CACCGCGCTC ACCGACGAGG GGCTGCTGGA GGAGCTGCCC
GACGCCGTCG CCCGCCCCGC GCGCCGGGTC GCGGACGTGC TGGCCGCCGG TCGGGTGGCG
CTGGCCCGCG ACGGGTCCGC GGAGGACGTG CTGTGGGCGA TGTGGCAGCG CAGTGGCCTG
GCCGGCCGGT GGGCGCGGGC CAGCGCCGCC GGCGGGGCGG CCGGAGCGGT CGCCGACCGC
GACCTCGACG CCGTCGTCGC GCTCTTCGAC GCCGCGGCCG GCTTCGTCGA CCGGCTGCCC
TCGGCCACCG TCGGCGCGTT CGTCGAGCAC CTGTCGGCAC AGGAGCTGCC CGGGGTCGGC
GGCGCGGGCC GGGAGTCGGC GACCGACGCC GTCCGGCTGC TCACCGCGCA CGCCTCCAAG
GGCCTGGAGT GGGACGTCGT CTGCGTGGCC GGCGTGCAGG AGGGCATCTG GCCCGACCTC
CGCGACCGCG GCACGCTGCT GGGCACCGAG GTGCTGGTCG AGCGGGTGGC GGGCATCGAC
GGCGCCGTTC TCGACCGGCG AGTGCAGATG CTGGCCGAGG AGCGGCGGCT GTTCTACGTC
GCCTGCACCC GCGCCCGCCG CCGGCTGGTG GTGACCGCCG TCGAGGGTGC CCTGGACGGA
CCCGACGCCG GCGCCACCGC CTCCCGGTTC CTCGACCTCG TCGTCCCCCC GCCCGACGAC
GGCCGGCCGC TGACGCCGCT GCCCCGTTCG CTCACGCTGC CCGCACTGGT CGCCGAGCTG
CGGCGGGCGG TCAGCGACCC GCAGACCGAG CCGGCCCGCC GGTCTGCCGC GGCCGCGGTG
CTGCGCCGGC TGGCCGACGA AGGCGTGCCC GGGGCCTCCC CGGCCGACTG GTGGGGCCTG
GCGCCGCTGT CCGACGACGC TCCGCTGGTG CCCGACGGCG AGGCGGTGCG GGTGCGCCCG
TCGGCGATCG AGACCTTCCA GCGCTGCCCG CTGAAGTGGG TGCTCGGCGC GGTCGGCGCC
GAGGCCTCGC CCGACGCGAC CCGCACCGTC GGCTCGGCGG TGCACGCCGT CGCGCAGCAG
GTGGCCGAGG GACTGCCCGC TGCCGGGGCA CCCGCCGCGC TGGCCGAGGA GCTCGACCAG
CTCGACCTCG GCCCCGGCTG GGCCGACCAG CGGCAGCGGA TCGCCGCCCG CGACATGCTC
GACCGGTTCC TGCGCTGGCA CGCCGCCAAC GGCCGCGAGC TGCTCGCCGC CGAGGCCGAC
TTCGACGTCA CCGTGGGGCG GGCCCGCATC CGCGGCCAGG TCGACCGGCT CGAGCGCGAC
GGCGCCGGCC GGCTGGTCGT GATCGACCTC AAGACCGGCC GCAGCGCCGC GCGCGACATC
GACACCCACG GGCAGCTGGC CGCCTACCAG GTGGCCGTCG CCGCCGGCGC GTTCGGCGAG
CACGGCGAGG CCCCCGGCGG AGCGGCGCTG CTGCAGGTCG GCTCCGGGAG CAAGGCCAAG
GAGCAGGCGC AGGACCCGCT GCCCGCCGGC GTCCCGGTGG GGGAGACCTG GGCCGGGGAG
CTGGTGGCGC AGGTCGGCGA CGGCATGGGC GCGGGCACCT TCGAGGTGCG CACCGGCAGC
CACTGCTCCC GGTGCCCGGC CCGGCGCAGC TGCCCGCTGC ACGAGCGCGG CCGGCAGGTG
ACCTCGTGA
|
|---|
| Protein sequence | MALRGDESTP VYCLVQPAVA SVPRPRLDPT QQAVVDHPGG PLLVLAGPGT GKTTTIVEAV
AARIDGGVDP EQILVLTFSR RAAAELRDRV AARVARTIRE PLARTFHSYA YGVLRRAALL
RGEAPPRLLT AAEQDALVAE LLRGDLAGEG AVRWPESLLP ALTTAGFRGE LRELLLRATE
RGVDAELLAA WSRETGNEAW LHAAAFQEQY EAVTAFSTAG GGDASGYDPA ELVRAAIAEL
EDDPALLRAE RERARWLFVD EYQDTDPAQV ELLQLLAGGG GDLVVVGDPD QAVYTFRGAE
PRGIVEFPER FRTVSGRPAP RLSLGVCRRS GPALLDVSRR VAEALPGPWE HRRLAAVEGA
EEGAAEVHVF GSASVEAAYV ADTLRRAHLV DGVPWSGMAV VVRTALAIGP LRRALTSAGV
PVEVGTDDLP LAAQPAVAPL LAALGALLPR PGAEPGTLAL DEPGAEALLT SALGGATVLD
LRRLRRAVRI AQARRGVDAD ERGAPLATAL TDEGLLEELP DAVARPARRV ADVLAAGRVA
LARDGSAEDV LWAMWQRSGL AGRWARASAA GGAAGAVADR DLDAVVALFD AAAGFVDRLP
SATVGAFVEH LSAQELPGVG GAGRESATDA VRLLTAHASK GLEWDVVCVA GVQEGIWPDL
RDRGTLLGTE VLVERVAGID GAVLDRRVQM LAEERRLFYV ACTRARRRLV VTAVEGALDG
PDAGATASRF LDLVVPPPDD GRPLTPLPRS LTLPALVAEL RRAVSDPQTE PARRSAAAAV
LRRLADEGVP GASPADWWGL APLSDDAPLV PDGEAVRVRP SAIETFQRCP LKWVLGAVGA
EASPDATRTV GSAVHAVAQQ VAEGLPAAGA PAALAEELDQ LDLGPGWADQ RQRIAARDML
DRFLRWHAAN GRELLAAEAD FDVTVGRARI RGQVDRLERD GAGRLVVIDL KTGRSAARDI
DTHGQLAAYQ VAVAAGAFGE HGEAPGGAAL LQVGSGSKAK EQAQDPLPAG VPVGETWAGE
LVAQVGDGMG AGTFEVRTGS HCSRCPARRS CPLHERGRQV TS
|
|---|
| |