Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_4164 |
Symbol | |
ID | 8755856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 4377937 |
End bp | 4379571 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003411098 |
Protein GI | 284992544 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.226942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTGCCA CGCTCGTCGC CCGCGGCCTG GCCGCCGGCC ACGGTGCCCG CGTCCTGTTC TCCGACCTCG ACCTCGTCGT CGCCCCCGGC GACGTCATCG GGCTGGTCGG GGTCAACGGC GCCGGCAAGT CCACCCTGCT GCGCACGCTG GCCGGCGAGC TGCCGGCCGA GTCGGGCAGC GTGACCGTCA GCCCGCCGAC GGCGACCCTC GGGTACCTCC CGCAGGAGCA CGAGCGGCGG CCGGGGGAGA CGGTGCGCCG GGCCCTGGCC CGCCGGACGG GCGTCGCGGC CGCGCAGGCC GCGCTCGACG CCGCCACCGA GGCGCTGGCC GCGGGCGCGG ACGGCGCCGA CGACGCCTAC GGGGAGGCCC TGGAGCGCTG GCTGGCCCTG GGCGGGGCCG ACCTCGACGA GCGGGCGGAG CAGGTCGTCG GCGAGGTGGC CCCCGGAGTG CCCCTCGACG CCCCGACGAC CGGCCTGTCC GGCGGGCAGG CCGCACGGGT CGGGCTGGCC GGGCTGCTGC TGTCGCGCTA CGACGTGCTG CTGCTCGACG AGCCCACCAA CGACCTGGAC CTGGCCGGCC TGGAGCAGCT GGAGCGCTTC GTCAGCCGGG CGCGCAGCGG CATCGTCGTC GTCAGCCACG ACCGGGAGTT CCTCGCCCGC ACGGTGACCC GCGTGGTGGA GCTGGACCTC GCCCAGCAGC TGGTGCGGGT GCACGACGGC GGCTACGAGG CGTACCTGGT CGAGCGGGAG GTGGCCCGGC GGCACGCGCG CGAGGAGTAC GAGGAGTACG CCGAGACCCG GGCCGACCTC GAGGCCCGGG CGCGCATGCA GCGCAACTGG CTGGCCAAGG GCGTGCGGGA CGCGGTCAAG AAGCAGAAGG ACCCGGACAA GTTCATCAAG GCCCACAACC GGGCGACGGC GGAGAAGCAG GGGGCCAAGG CCAAGCAGAC CGAGCGGCGG ATCGAGCGGC TGGAGGTGGT GGAGGAGCCG CGCAAGGAGT GGGAGCTGCG GATGGAGATC GCCCCCGCGC CGCGGGCCGG CGCGGTGGTC GCCACCCTCG CCGGCGCGGT CGTGCGCCGC GGCGACTTCA CCCTCGGCCC GGTCGACCTC CAGGTGGACT GGGGCGACCG CGTCGTGATC ACCGGCCCCA ACGGCAGCGG CAAGTCCACG CTGCTGGCCG CGCTGCTGGG CCGGGTGCCG CTGGACGAGG GCCGCGGCGG CCTCGGGCCG TCGGTGCGCA TCGGCGAGAT CGACCAGGCG CGCGGAGCGT TCCTCGGCTC GGAGCCGCTG CTGGAGGCCT TCGCCGCGGA GGTGCCCGAC CGGCCCACCG CCGAGGTGCG CACCCTGCTG GCCAAGTTCG GGCTCACCGC CGAGCACGTG CTGCGCTCGG CCGACACCCT CTCGCCGGGG GAGCGGACCC GGGCCGGGCT CGCGCTCCTG CAGGCCCGCG GGGTCAACGT GCTGGTCCTC GACGAGCCGA CCAACCACCT CGACCTGCCG GCCATCGAGC AGCTCGAGCA GGCGCTGTCG GGCTACCGCG GCACGCTGCT GCTGGTCACC CACGACCGGC GGATGCTGGC CGCGGTGGAC ACCACCCGCC GGCTCACCGT CGAGGACGGC CGGGTCACCG AGTAG
|
Protein sequence | MSATLVARGL AAGHGARVLF SDLDLVVAPG DVIGLVGVNG AGKSTLLRTL AGELPAESGS VTVSPPTATL GYLPQEHERR PGETVRRALA RRTGVAAAQA ALDAATEALA AGADGADDAY GEALERWLAL GGADLDERAE QVVGEVAPGV PLDAPTTGLS GGQAARVGLA GLLLSRYDVL LLDEPTNDLD LAGLEQLERF VSRARSGIVV VSHDREFLAR TVTRVVELDL AQQLVRVHDG GYEAYLVERE VARRHAREEY EEYAETRADL EARARMQRNW LAKGVRDAVK KQKDPDKFIK AHNRATAEKQ GAKAKQTERR IERLEVVEEP RKEWELRMEI APAPRAGAVV ATLAGAVVRR GDFTLGPVDL QVDWGDRVVI TGPNGSGKST LLAALLGRVP LDEGRGGLGP SVRIGEIDQA RGAFLGSEPL LEAFAAEVPD RPTAEVRTLL AKFGLTAEHV LRSADTLSPG ERTRAGLALL QARGVNVLVL DEPTNHLDLP AIEQLEQALS GYRGTLLLVT HDRRMLAAVD TTRRLTVEDG RVTE
|
| |