Gene Gobs_4100 details

Gene Information

• Locus tag: Gobs_4100
• ID: 8755791
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: +
• Start bp: 4309233
• End bp: 4311296
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 71%
• Product: alpha amylase catalytic region
• Protein accession: YP_003411036
• Protein GI: 284992482

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.665704
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTCACCC GACGGGCCCT CGATAGCGTG GCGGGGATGA CTGGCCGCGC TGACCTCCGC 
CTCGGCATCA CCGATGTCGC CCCCGTCGTG TCCTGCGGCG CGTTCTCCGC GCGCGCCGTG 
ATCGGTGAGC ACCTGCCGAT CACCGCGACC GTCTTCCGCG AGGGCCACGA CGCCGTCGCG 
GCGGACGTCG TCGTGACCGG CCCGGACGGC TCACGTCAGC CGTTCAACCG GATGGAGCGC 
TTCGGCGACC AGCCCGACCG CTGGCTGACG ACGGTCGTCC TCGACCGCGA GGGCCGGTGG 
ACCTACCGGG TGGAGGCGTG GAGCGACCCG CTCGCGACCT GGCACCACGC CGTCGAGGTC 
AAGATCGCCG CCGGTCAGGG GCCCGAGGAG CTCGCCAACG ACCTGGAGGA GGGCGCCCGG 
CTGCTCGACC GGGTGGCCGC CGAGGCCGAC GCCGACTGGC GCGACCGCGT CGCCGAGGCC 
GCCGCAGCGC TGCGCGACAC CTCCCGGGAG CTGCCCGCCC GGGTCGCCCC GGCGCTGGCC 
GAGGCGGTGC AGCGGTACCT GCACGACCAC CCGGTGCGCG AGCTGGTCAC CCCCGGGCCG 
GAGTGCGAGG TCTGGGTCGA CCGGCCCCGC GCGCTGTTCG GTTCCTGGTA CGAGTTCTTC 
CCCCGCTCCA CCGGCCCGGT CGTCGACGGC CGGCCCACGC ACGGCACGTT CGCCACCTCG 
GCCGAGCGGC TGCCCGCCAT CGCCGACATG GGCTTCGACG TGGTGTACCT GCCCCCGATC 
CACCCGATCG GCACGGTCAA CCGCAAGGGC CCGAACACCC CGCAGTTCCC GGGCGGCAAC 
CCCTACGAGA TCGGGCCGGA CGACCCGGGT TCACCGTGGG CCATCGGCAG CGCCGAGGGC 
GGGCACGACG CCGTCCACCC GCAGCTGGGC ACGATGGAGG ACTTCCGCGC CTTCGTCGAC 
CGCACCCGCG AGCTGGGCAT GGAGGTGGCG CTGGACTTCG CGCTGCAGGC CGCGCCCGAC 
CACCCCTGGG TCAAGGAGCA CCCGGAGTGG TTCACCACCA AGCCCGACGG CACGATCTCC 
TACGCGGAGA ACCCGCCGAA GAAGTACCAG GACATCTACC CGGTCAACTT CGACAACGAC 
CCCGAGGGCA TCTACGCCGA GTGCCTGCGG GTCATCCGGG TGTGGATGGA CGCCGGGGTG 
CGGGTGTTCC GCGTCGACAA CCCGCACACC AAGCCGCTGA ACTTCTGGCA CTGGCTGATC 
TGGACGGTCA AGGAGACCGA CCCGGACGTG CTCTTCCTCG CCGAGGCCTT CACCCGGCCG 
GCGATGATGC ACCAGCTGGC CCGCATCGGG TACACGCAGT CCTACACGTA CTTCACGTGG 
CGCACGGGGC GCGAGGAGCT CGAGGAGTAC GGCCGCGAGC TGGCCGCCAA CAGCCACTAC 
ATGCGGCCGA ACTTCTTCGT CAACACCCCG GACATCCTGC ACGCGTCGCT GCAGCTCGGC 
GGCCCGCCAG TGTTCAAGAT CCGCGCCGTC CTGGCGGCGA TGATGAGCCC GACGTGGGGT 
GTCTACTCGG GCTTCGAGCT CTTCGAGCAC GTCGCGGTGC GCCCCGGCAG CGAGGAGTAC 
CTCGACAGCG AGAAGTACCA GCTGCGGCCG CGCGACTGGG CCGCCGCCGA GTCCTCCGGG 
CGCAGCCTCG TGCCCTACCT GCGCCGGCTC AACGAGATCC GCCGCGCGCA CCCGGCCCTG 
CAGCAGCTGC GCACGCTGCG GTTCCACTCC GTGGACAACC CGAACCTGAT CTGCTTCACC 
AAGACCGACC CCGGCTCCCA GGACGCCGTC CTGGTGGTGG TGAACCTCTC CAGCCACCAC 
ACCCAGATCG GCACGACGTC CCTGGACCTG CCGGCGATCG GGCTGGACTG GTACGAGCGG 
TTCACCGTGA CCGACGAGCT GACCGGCGAC AGCTGGAACT GGGGCCAGTT CAACTACGTC 
GAGCTCGACC CCTACCGGGA GCCGGCGCAC GTCTTCTCGA TCACCTACCC CCGGCAGGTC 
CAGGTACCAC CGCCGGTGGC CTGA 

 

Protein sequence

MLTRRALDSV AGMTGRADLR LGITDVAPVV SCGAFSARAV IGEHLPITAT VFREGHDAVA 
ADVVVTGPDG SRQPFNRMER FGDQPDRWLT TVVLDREGRW TYRVEAWSDP LATWHHAVEV 
KIAAGQGPEE LANDLEEGAR LLDRVAAEAD ADWRDRVAEA AAALRDTSRE LPARVAPALA 
EAVQRYLHDH PVRELVTPGP ECEVWVDRPR ALFGSWYEFF PRSTGPVVDG RPTHGTFATS 
AERLPAIADM GFDVVYLPPI HPIGTVNRKG PNTPQFPGGN PYEIGPDDPG SPWAIGSAEG 
GHDAVHPQLG TMEDFRAFVD RTRELGMEVA LDFALQAAPD HPWVKEHPEW FTTKPDGTIS 
YAENPPKKYQ DIYPVNFDND PEGIYAECLR VIRVWMDAGV RVFRVDNPHT KPLNFWHWLI 
WTVKETDPDV LFLAEAFTRP AMMHQLARIG YTQSYTYFTW RTGREELEEY GRELAANSHY 
MRPNFFVNTP DILHASLQLG GPPVFKIRAV LAAMMSPTWG VYSGFELFEH VAVRPGSEEY 
LDSEKYQLRP RDWAAAESSG RSLVPYLRRL NEIRRAHPAL QQLRTLRFHS VDNPNLICFT 
KTDPGSQDAV LVVVNLSSHH TQIGTTSLDL PAIGLDWYER FTVTDELTGD SWNWGQFNYV 
ELDPYREPAH VFSITYPRQV QVPPPVA