| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3995 |
|---|
| Symbol | |
|---|
| ID | 8755683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 4192221 |
|---|
| End bp | 4193156 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003410932 |
|---|
| Protein GI | 284992378 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGCCC GCACCGCCGA CGCGCGCGCT GCGCTGCCGC CGGTGCTGGC GGAGGCGCTG
GCCGGGTACG AGGAGCACCT GCGCACCCAG CGCGACCTCT CCGAGCACAC CGTCCGCGGC
TACGTCGGCG ACGCGGTCTG GCTGCTGGAC CACCTGGTCC GCCGTGGCGG CACCCGGGTC
GACGACCTGG ACCTGGCGAC GCTGCGCAGC TGGCTGGCCC AGGGCCGCAC CCGCGGTGCC
GGCCGGGCGA CCACCGCCCG GCGCGCCGCG GCCGCCCGGT CGTTCACCGG CTGGCTGCGC
CGGGCCGGCC TCACTGCCGA GGACGTCGGC CTGCGGCTGG TCAGCCCCAA GGCGCAGCGC
ACGCTCCCCG ACGTGCTGGC CCCCGACCAG GCCCGCGTGG TCGTCGAGTC GGCGGCCGGG
GCCGAGGAGC CGGTCGGCCT GCGCGACGCG GTGGTCCTCG AGCTGCTCTA CGCCAGCGGG
ATCCGGGTCA GCGAGCTGGT CGGCCTCGAC GTGGACGACG TCGACCGGGG CCGTCGCCTG
CTGCGCGTGC TGGGCAAGGG CCGCAAGGAG CGCAGCGTCC CCTACGGCGT CCCGGCCGAG
CGGGCGCTGG ACGCCTGGCT CACCCGGGGC CGGCCGGCGC TGGCCACGGA GCGGTCGGGC
CCGGCGCTGC TGCTCGGCCT GCGCGGTGGG CGGCTGGACG CCCGCGAGGT CCGCCGCACC
GTCCACGCCG CCGTGGCCGC CGCGCCGGGT GCTCCCGACA TCGGCCCGCA CGGCCTGCGG
CACTCCGCCG CCACCCACGT GCTCGAGGGC GGCGCGGACC TGCGCTCGGT GCAGGAGCTG
CTCGGGCACG CGAGCCTCGC GACCACCCAG ATCTACACGC ACGTCACCGT GGAGCGGCTG
CGTGCCGTCC ACGCGCAGGC GCACCCGCGT GCCTGA
|
|---|
| Protein sequence | MTARTADARA ALPPVLAEAL AGYEEHLRTQ RDLSEHTVRG YVGDAVWLLD HLVRRGGTRV
DDLDLATLRS WLAQGRTRGA GRATTARRAA AARSFTGWLR RAGLTAEDVG LRLVSPKAQR
TLPDVLAPDQ ARVVVESAAG AEEPVGLRDA VVLELLYASG IRVSELVGLD VDDVDRGRRL
LRVLGKGRKE RSVPYGVPAE RALDAWLTRG RPALATERSG PALLLGLRGG RLDAREVRRT
VHAAVAAAPG APDIGPHGLR HSAATHVLEG GADLRSVQEL LGHASLATTQ IYTHVTVERL
RAVHAQAHPR A
|
|---|
| |