Gene Gobs_3979 details

Gene Information

• Locus tag: Gobs_3979
• ID: 8755667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: -
• Start bp: 4178025
• End bp: 4178741
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 76%
• Product: protein of unknown function DUF125 transmembrane
• Protein accession: YP_003410917
• Protein GI: 284992363

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.370898
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCTCGG GGCCCCCGGC AGCCGAGGCG CACGAGCACA CCCACGCCGA CGTCTCCGGC 
GGCTGGCTCC GGGCCGCGGT CTTCGGCGCC ATGGACGGGC TGGTGACCAA CACCGCGCTC 
GTCGCCGGCG TCGGCGGCGG TGGGGCCTCC GCCCGCGCGA TCGTGCTCTC CGGGGTGGCC 
AGCCTGGTCG CCGGTGCCAT CTCGATGGCG CTGGGGGAGT ACACCTCGGT GCGGACGCAG 
AACGAGCAGC TCGACCTCGA GGTGGAGAAG GAGCGCCGGG AGCTCGAGCG CAACCCGGGC 
GGGGAGCTCG CCGAGCTGGT GCAGATGCTG CGGGGCCGCG GCGTGGACGC CGACCTCGCC 
CAGCAGGTCG CCGTCCAGCT GCACCGCGAC CCCGACACCG CCCTGCGGCT GCACGTGGTC 
GCCGAGCTGG GGCTCAACCC GGCCGACCAG CCCTCGCCGC GGACGGCGGC GGTCTCCTCG 
TTCCTCACCT TCGCCACCGG CGCGGTGATC CCGCTGCTGC CCTACCTGCT CGGCTTCTCG 
CTGCTGTGGG CGGCGCTGCT GTGCGGCGGA CTCGGTCTGG CGGCGGCGGG CGCCCTGTCG 
TCGCGCTTCA CGCCGCGGCC CTGGTGGTAC GCGGCAGGGC GCCAGCTGCT CTTCGGCGCG 
GTCGCGGCCG GGGTCACCTA CGCGATCGGG CTGGCGATCG GCGTCGGCGT CTCCTGA 

 

Protein sequence

MSSGPPAAEA HEHTHADVSG GWLRAAVFGA MDGLVTNTAL VAGVGGGGAS ARAIVLSGVA 
SLVAGAISMA LGEYTSVRTQ NEQLDLEVEK ERRELERNPG GELAELVQML RGRGVDADLA 
QQVAVQLHRD PDTALRLHVV AELGLNPADQ PSPRTAAVSS FLTFATGAVI PLLPYLLGFS 
LLWAALLCGG LGLAAAGALS SRFTPRPWWY AAGRQLLFGA VAAGVTYAIG LAIGVGVS