| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3825 |
|---|
| Symbol | |
|---|
| ID | 8755510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 4008315 |
|---|
| End bp | 4009673 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF2254, membrane |
|---|
| Protein accession | YP_003410769 |
|---|
| Protein GI | 284992215 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.4512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGTCGA GACCGCGCGG GGGACGCGTA CAGGCGCTGC GGGAGGCAAC CACCGGGGCG
CTGTGGCCGC TGCCCACGGC GGCGATCCTG CTCGCCGTGG GGCTCGGCAT CGGGCTCACC
GAGCTGGACC AGGCGCTCGG CTACGGCGAG GACCCGATCC GGTTCGTGTT CACCGGTGGA
CCGTCGGCTG CCCGCACCCT CCTCTCGGCG ATCGCCTCGT CGCTGATCTC GGTGACCACC
CTGCTGTTCT CGCTGACGAT CGTGACCCTG CAACTGGCCA GCAGCCAGTA CTCCCCTCGG
CTGCTGCAGA CCTTCGTCCG GGACCGGGTG GTCCAGACCT GTCTCGGCGT GCTGCTCGGG
ACGTTCGTCT ACGCCCTCGT CGTGCTGCGT ACCGTGCGCT CGGCCGACGA GGCCCAGGGC
AGCTCCTTCG TGCCGCGCAT CTCGGTGACC GTCGCCTTCC TGTTCGCGCT GGCCTCGGTC
GCGGCGCTCG TGACGTTCCT CAGCCACCAG ACCCGGCAGC TGCGGGTCGA GACGATGATG
CGCGACGTCC ACTCGGAGTC CGCCCGCACC AGGGCGCGGT TGCACGAGCG CCAGGAGGAG
GACCAGCAGC CCGACCGCCC GCTCCCGCAG GTCCCCGACT CGGCCCGCCC GCTGTGTGCG
CGGTCGAGTG GCTTCCTGGT GCAGGTGTTC GAGGGCCCGC TGCTCGAGGC GGTCACCGGC
GCCGGCGCCG TGCTGCTGCT CGACCGGCGC CCCGGCGACA CGGTCGTCGC CGGGGCGCCG
ATGGCCTGGG CCTGGTCGCA GGACGCCGGA AATGGCGTCC AGGTGGAGGA GCTCGAGAAG
GCGCTGCAAC GCGCGGTGCA CCTGGGCCAC GAGCGGGCCG ACGTCGCCGA TCCCAGCTAC
GGGCTGCGCA AGCTGGTGGA CATCGCCGCC CGAGCCCTGT CCCCCGGCAT CAACGACCCG
ACGACCGCCG GGCACGCGCT GTCGCACGTC TCGGCGCTGC TGGGCGATGC GGCCGCGCGG
GACACCTGGC ACCGCCGGCT GACCGACGAG GACGGCGCCG AGCGCCTGGT CCTCCGGTCC
TGGACCTTCT CCGAGCTGCT GGAGCTCGGG GTCACCCAGG TCCGCTACTA CGGCCGGGAG
GACCTCACCG TCGTCGACCG GTTGTTCGCG CTGCTGGCCG AGGTGGCGTG GCGGGCCCGC
ACACCTGCCC AGCAGCGGGC CGTGCGGCAG CACCTGGATG CCCTGGTCGA GCAGAGCCGC
ACCAGCCCAC CGGCCGGGCG CACTCTCGAT GACGTGCAGC GGTGGGCCCG GACCGTGGAC
GAGGCACTGG CCGGGAGGTG GCTGCGACCG GCGAGTTGA
|
|---|
| Protein sequence | MRSRPRGGRV QALREATTGA LWPLPTAAIL LAVGLGIGLT ELDQALGYGE DPIRFVFTGG
PSAARTLLSA IASSLISVTT LLFSLTIVTL QLASSQYSPR LLQTFVRDRV VQTCLGVLLG
TFVYALVVLR TVRSADEAQG SSFVPRISVT VAFLFALASV AALVTFLSHQ TRQLRVETMM
RDVHSESART RARLHERQEE DQQPDRPLPQ VPDSARPLCA RSSGFLVQVF EGPLLEAVTG
AGAVLLLDRR PGDTVVAGAP MAWAWSQDAG NGVQVEELEK ALQRAVHLGH ERADVADPSY
GLRKLVDIAA RALSPGINDP TTAGHALSHV SALLGDAAAR DTWHRRLTDE DGAERLVLRS
WTFSELLELG VTQVRYYGRE DLTVVDRLFA LLAEVAWRAR TPAQQRAVRQ HLDALVEQSR
TSPPAGRTLD DVQRWARTVD EALAGRWLRP AS
|
|---|
| |