| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3776 |
|---|
| Symbol | |
|---|
| ID | 8755461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 3958620 |
|---|
| End bp | 3959390 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | 5-carboxymethyl-2-hydroxymuconateDelta- isomerase |
|---|
| Protein accession | YP_003410724 |
|---|
| Protein GI | 284992170 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG CCCGCTACAC CCCGGCCGCC GGCGGTCCGG CGTCCTACGG CCTGGTCGAG
GGGGACGGCG ACGACGCCGT CGTCGTCCGG CTCGAGGGGA ACCCCTTCGA CGGCGTCCGG
ACGACGGAGG AGCGGACCCC GCTCGGTCAG GTGCGGCTGC TCGCCCCGGT CGAGCCCAGC
AAGGTGCTGT GCCTCGGCCG CAACTACGCC GAGCACGCCA AGGAGCTGGG CAACGAGGTG
CCGGAGATCC CGGTCGTGTT CGCCAAGTTC TCCACGTCGG TGGTGGGCCC CGACGCCGAG
GTGCCCTATC CGCCGGACAC CGGGAACCTG CACTTCGAGG GCGAGCTGGC GGTCGTGATC
GGGCAGGAGT GCACGCGGGT GCCGGCCGAC CGGGTGGCCG ACGTCGTGCT CGGCTACACC
GTCGCCAACG ACCTCACGAT GCGGGACATG CAGCGTGCGG AGAAGCAGTG GACCCGCGCC
AAGGGCTTCG ACCGCTCGTG CCCGCTGGGG CCGTGGGTGG AGACCGACGT CGACCCGGCG
GCGTTGTCCC TGCGGACCAC CGTCAACGGC GACGTGAAGC AGGACGGCAC GACCGCCGAC
ATGCTGCTCG ACGTCGCCGC GTGCGTGTCG TGGGTCAGCC AGACCATGAC CCTGCTGCCC
GGCGACGTCG TGCTCACCGG CACCCCGGCC GGGGTCGGGC CGCTGCAGGC CGGCGACGAG
GTGACGGTGA CGCTGGAGGG GATCGGGTCG CTGTCCACCC GCATCGTCTG A
|
|---|
| Protein sequence | MRIARYTPAA GGPASYGLVE GDGDDAVVVR LEGNPFDGVR TTEERTPLGQ VRLLAPVEPS
KVLCLGRNYA EHAKELGNEV PEIPVVFAKF STSVVGPDAE VPYPPDTGNL HFEGELAVVI
GQECTRVPAD RVADVVLGYT VANDLTMRDM QRAEKQWTRA KGFDRSCPLG PWVETDVDPA
ALSLRTTVNG DVKQDGTTAD MLLDVAACVS WVSQTMTLLP GDVVLTGTPA GVGPLQAGDE
VTVTLEGIGS LSTRIV
|
|---|
| |