Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3451 |
Symbol | |
ID | 8755133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 3632186 |
End bp | 3636259 |
Gene Length | 4074 bp |
Protein Length | 1357 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | WD40 repeat, subgroup |
Protein accession | YP_003410420 |
Protein GI | 284991866 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCTC TGTTCATCAG TCACAGCAAC CAGGACCGGG TCTCGACGGA GCGAGTGGGC AGCTGGCTGC AGAGAGCCGG TTTCACCACG GTCTTCGTGG ACTTCGACCC AGAAGACGGC ATACCGGCGG GGCGGAACTG GGAACGCGAG CTGTACGCCC AGTTGCGTCG TACCGAGGCC GTGGTCTTCC TTGCAAGTCA CGCCGCGACG GCGTCCCGTT GGTGCTTCGC AGAGCTCAGT CTGGCGCGGT CGTTGGGGCA TCCCGTCTTC CCCCTGGGTC TCGAGCCCGG GGTGCGACTC CCACTCCTGG CGGACGTGCA GTGGATCGAC CTGACCGATG CCGATCTCGC CTCTGACGGG CACGACGGGG ACGGAACCGA CCGGCCGCCT GCACTGCTCA GGCTCCTGGC GGGCCTGCGG GCGGCAGGTC TCGACCCGGC GGATGCGTTC TCCTGGGACC CGAACCGGTC GCCCTACCCG GGGTTGGCGC CCTTCGACCC GGAGGACGCC GCGGTCTTCT TCGCCCGGGA ACGGGAGACC GAGCGGTTGC TCGAGCTGCT GCACCCGACC CTGCAGCACG GTGCAGGCCG GTTCGTGGCT GTCGTCGGCC CGTCCGGGAG CGGTAAGTCC TCGCTCCTGC GCGCCGGGCT GCTGCCCCGG CTCGCCCGGT CGCCGACGCA GTGGATCCTC GTGCCGCCGC TACGACCGGG GAGCCGCCCC ACCCACCACC TGGCCGCCTG CCTGGCCGAG GCCTTCACCG AGCGCGGCCA CCCCCGATCC ACCGCCGATG TCGAGGGCGT CCTCAGCCGT GGGCCGGAGG GGTTGGTCCT CCTCGCCCGG GAGCTGGCCG ACCTGGCCGG GAAGGGAACC GGTCAGCCGG CCTCGCTGGT GGTGATCGAC CAGGCCGAGG AACTGGTCAC CGTCTGCGGA ACGCGAGAGC AGCAGTCGTT CCTCAGGCTG CTGGACGGTG CGCTCGGTGA GGACACGCCC CTGTGGGTGG TCGCCTCTGT CCGCTCCGAG TTCCTCGCCA CCGCCCCGGA GCGGGCCGGG CTCGCCGAGG TGATCGACGA TCCCCTCGTG GTGGAGCCGC TCGGTCGTGG CCGACTCGCC GAGGTGATCG CCCGGCCGGC CCAGAGAGCG GGGTTGGACC TGCAGGCGGG GCTGGTCGAG CGGATGGTCG AGGACACCGC CGGCGGGGAC GCCCTGCCGC TGCTGGCCTA CACCTTGCGA GAACTGGCGG AGCGGTCCGG GCTCGACGGC CGGATGAGCC TGGCCGAGTA CGACGCCGTG GGCGGAGTGG TCGGTGCCCT CCGGCGCCAT GCCGACCGCG TCCACGACGA GCTCTCGCGC CGTGGGCTCG GCGTTTCCGT CGTCCCCACC CTGCTCAAGC TGGTCACCGT CAGCCCCGAG GGGGAAACGA CCCGGCGCCG CGTGTCCTGC AGTGCGCTGG CCGCCGACGA GCGCGCGGTG GTCGACGCCT TCGTCGACGC CCGGCTGCTG GTGAGTCACG ATGCGGCCTC CAGTCCACCT GGTGACCGAG CCACGAGAGA TGCCGTGGTG GAGGTCGCGC ACGAGGCGCT TCTGCGGCAG TGGCACCCGC TGCGGGACGC CGTCGAGGCC GACCGGTTGA GCCTAGAGCT CCGGTCCGAA CTGGAGAGAC ACGCCGCGGA CTGGAAGCAC GGCAACCGCG ACGAGTCCTA CCTGCTGCGC GGCGGGCGGC TCGCGGCCAT CGGTGAGTGG GCCGACGAGC ACGTCGGCGA GCTGGGACCG GTCGAGAGCC AGTACCTGCA GGCCAGCCGG GCGCTGGCCG CGCGCGAGCT GGAGACGGCC CGGCGCTCGA ACCGGCGGCT GCGCGTACTG GCCGCCGCTC TGGCGGTCCT GCTGCTGGCA GCCGTCGCCG CAGGGGGACT GGCCCTGCAC CAGAACCGCG AGGCGCAGGG GCAGGCGCGC TTGGCCATGT CCCGCCAGAT CGCGGCCGAG TCCGGCGATC TCGTCCAGGG CAAGCCCGAC ACGGCGATCC TCGCCGGCCT GCAGAGCATG AGCCTGGCCG GCGGCGAGCA GCCGGACCCC ATCCCGCCGG ACGGGCTGAT CACCGGCCTG GCCCGGATGA CGCACACGTC TCAGCTCCTC AGCGGTCACA CCGGCCCGGT GTGGGGGGTG GCGTTCAGCC CGGACGGTCG GCTGCTGGCC ACCAGCAGCG GGGATCGGAC CGTGCGGCTG TGGGAGGCCG ACTCTGGCCG GCCGGCCGGC GATCCGCTGA CCGGGCACAC GGCCGCCGTC AGGGACGTGG TGTTCAGCCC GGACGGGGCT CTGATGGCCA CCGCCGGGGG TGACCAGACA CTGCGGCTCT GGGACGTGGC GACCCGGCAA CCGCACGGCC AGCCGCTCAC CGGCCACGCC GCGGGGTTGT GGGCGGTCGC GTTCAGTCCC GACGGGAGCC TGCTGGCGAC GGCGGGTGCC GACCACACGG TGCGGCTGTG GGACGTGGCG ACCGGTCTAC CGTGGGGCTC GCCACTGACC GGCCACACGG ACGAGGTCCG CGACGTGACC TTCAGCCCGG ACGGCGCCCA GCTGGCGACC GTCGGCGTCG ACCGGACGCT GCGGCTGTGG GACGTGGCGA CCGGACAGGC TCTCGGGGAG CCACTGACGG GGCACGAGGA CGAGGTCCGC GGGGTGGCCT TCAGCCCCGA CGGGACACTG CTGGCGACCG CCAGTGCCGA CCGGTTCGTG CAGCTGTGGG ACGCGGTCAC CGGGCAGCCC CTGGGGCAGC CGCTCGGTGG CTACTCGGGC CCGGTCTGGG CGGTGGCGTT CAGCCCTGAC GGCGGGTTGG TGGTCAGCGC AACCCAGAAC GGGACGGTGC AGCTGTGGGA CACCGCGTCG GGGCAGCCCT ATTCGCAGCC GCTGGTCGGC CACACCATGT GGGCGGACGG CGTGGCGTTC AGCCCGGACG GGTCCCGGGT CGCCAGCGTG AGCCTCGACC AGACGGCGCG GATCTGGGAC GTGACTGAGA CGTCCTCCGT CAGTCAGGCG CTCGCCGGCC ACACCGACGT GGTGAACGAG GTGGTGTTCA GCCCGGACGG GAACCTGCTG GCCAGCGCCA GTGCCGACCA GACGGTGCAG CTGTGGGACG TTGCGACCGG TCAGCCGACC GGTCAGCCGC TGGTCGGTCA CAACGATTGG GTGAACGGGG TGGCGTTCAG CCCGGACGGG GACCTGCTGG CCAGTGGAGG TGACGACCAG GCGGTGCGGC TGTGGGACGT GGCGACCGGT GAGCCCCGCG GTGAGCCGTT GACCGGGCAC ACCGACTGGG TGCTCAAGGT GGCGTTCAGC CCGGATGCAG AGCTGCTGGC CAGCGCGGGC CAGGACCGGA CGGTGCGGCT GTGGGACGTG GCGACGGGTG GCCCCCGCGG TGAGCTGTTG ACCGGGCACA CCGACTGGGT GAGTGGGGTG GCGTTCAGCC CGGACGGGGA CCTGCTGGCC AGTGCCAGTG GGGACCAGAC GGTGCGGCTG TGGGACGTGG CGACGGGAGA GCCCCGCGGT GAGCCGCTGG CCGGCCACAC CGGTTACGTG CAGGACGTGG CGTTCAGCCC CGACGGTCGC CTGATGGCCT CGGGCAGCAC CGACAACACC GTCCGCCTGT GGGACGTCGC GTCCGGGCAG CCCCACGGGG AGCCGCTGAG GGGGCACACC AACACCGTGC TGAGCGTGGC CTTCAGCCCG GACGGTCGGC TGCTGGCCAG CGTGGCGGAC GATCGGACGC TGCGGCTGTG GGACGTGGCG ACCGGGCAAC CCCATGGCCC GTCGCTGACG GGACACGAGA ACGAGATACG AGGAGTGGAG TTCAGCCCGG GAGGCCGGTG GGTGGCGACC GGCAGCCGTG ACGGCCTGGT GCGCTTGTGG GACACCGAGT TCACGTCCTG GGTCGAGGCC GGCTGCACGA TGGTGAGCCG GAACCTCTCC ATGACCGAGT GGGAGCAACT GGCTCCCGGG ATGGCCTACG AGCGGACGTG TCCCGACCTG CCCGCGGGAG AAGGTGCCCC TCGGGACGCT CCCGTCGCTC GCTACTCGAG CTGA
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Protein sequence | MPALFISHSN QDRVSTERVG SWLQRAGFTT VFVDFDPEDG IPAGRNWERE LYAQLRRTEA VVFLASHAAT ASRWCFAELS LARSLGHPVF PLGLEPGVRL PLLADVQWID LTDADLASDG HDGDGTDRPP ALLRLLAGLR AAGLDPADAF SWDPNRSPYP GLAPFDPEDA AVFFARERET ERLLELLHPT LQHGAGRFVA VVGPSGSGKS SLLRAGLLPR LARSPTQWIL VPPLRPGSRP THHLAACLAE AFTERGHPRS TADVEGVLSR GPEGLVLLAR ELADLAGKGT GQPASLVVID QAEELVTVCG TREQQSFLRL LDGALGEDTP LWVVASVRSE FLATAPERAG LAEVIDDPLV VEPLGRGRLA EVIARPAQRA GLDLQAGLVE RMVEDTAGGD ALPLLAYTLR ELAERSGLDG RMSLAEYDAV GGVVGALRRH ADRVHDELSR RGLGVSVVPT LLKLVTVSPE GETTRRRVSC SALAADERAV VDAFVDARLL VSHDAASSPP GDRATRDAVV EVAHEALLRQ WHPLRDAVEA DRLSLELRSE LERHAADWKH GNRDESYLLR GGRLAAIGEW ADEHVGELGP VESQYLQASR ALAARELETA RRSNRRLRVL AAALAVLLLA AVAAGGLALH QNREAQGQAR LAMSRQIAAE SGDLVQGKPD TAILAGLQSM SLAGGEQPDP IPPDGLITGL ARMTHTSQLL SGHTGPVWGV AFSPDGRLLA TSSGDRTVRL WEADSGRPAG DPLTGHTAAV RDVVFSPDGA LMATAGGDQT LRLWDVATRQ PHGQPLTGHA AGLWAVAFSP DGSLLATAGA DHTVRLWDVA TGLPWGSPLT GHTDEVRDVT FSPDGAQLAT VGVDRTLRLW DVATGQALGE PLTGHEDEVR GVAFSPDGTL LATASADRFV QLWDAVTGQP LGQPLGGYSG PVWAVAFSPD GGLVVSATQN GTVQLWDTAS GQPYSQPLVG HTMWADGVAF SPDGSRVASV SLDQTARIWD VTETSSVSQA LAGHTDVVNE VVFSPDGNLL ASASADQTVQ LWDVATGQPT GQPLVGHNDW VNGVAFSPDG DLLASGGDDQ AVRLWDVATG EPRGEPLTGH TDWVLKVAFS PDAELLASAG QDRTVRLWDV ATGGPRGELL TGHTDWVSGV AFSPDGDLLA SASGDQTVRL WDVATGEPRG EPLAGHTGYV QDVAFSPDGR LMASGSTDNT VRLWDVASGQ PHGEPLRGHT NTVLSVAFSP DGRLLASVAD DRTLRLWDVA TGQPHGPSLT GHENEIRGVE FSPGGRWVAT GSRDGLVRLW DTEFTSWVEA GCTMVSRNLS MTEWEQLAPG MAYERTCPDL PAGEGAPRDA PVARYSS
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