Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3444 |
Symbol | |
ID | 8755125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 3623179 |
End bp | 3627105 |
Gene Length | 3927 bp |
Protein Length | 1308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | WD-40 repeat protein |
Protein accession | YP_003410415 |
Protein GI | 284991861 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.777666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTCGG CGCAGGCCCG CGTCGAGGTG TGGCACCCGG TCGACCCCAG CGACAGGGGT GACATCGCCA TCCTGTCATT CGGGGGCGAA CTCCCACGGG GTCCTGTTCC CGCCCGGCTC GTCTCGTCCG ACGACTTCTG GGGACATCCG TTCCGGACAT TCGGATTTCC CCGACGTCAC GATCACGGTG TATGGGCGGC CGGGGTCCTG AGAGGTTCCC AGGGCGCCGG CTGGGTCCAG ATGGAAGCGA TTTCCTCCGG CTACCCCGTC GAAGCGGGCT TCAGCGGTGG TCCGGTCTGG GACGATGAGC TGGCAGGCGT GGTTGGCATG ACCGTGGCGG CGGATGCGCG GAGCGATCTG CGTACGGCAT ATCTGATCCC CGCCAGCACG CTGATCGACG CTTTTCCGCC CCTGGCTCGC CACACGTTGC CTCCCTGCCC GTATCGCGGC CTGTACCCGT TCCGGGTTCA AGACGCCTCG CTCTTTTTCG GCCGGGAGGA CCTCACCGAC CGACTGGTGC GGGAGGTCAC GCGCCGGCCA CTCGTCGCGG TGGTGGGCCC CTCGGGCAGC GGTAAGTCGT CGGTGGTCTT CGCCGGGCTC CTGCCGCAGC TGCTGCAGCA GCCGGGCTGG GTAAGCGTGA GCATGCGCCC TGCGCAGGCA TCGTCCCCAC TGCACGCCTT GGCCGGCGCG ATCCTTCCCG TGCTCGAGCC GGACCGCTCT GAGACGGAGC GGCTCGCCGC CATGGACCCG CTCACCGACG TCCTGCGCGA CGGTCACCTG CCCGATGTCA TCAGCAGGGT GCTGGTGCGG CAGCACGCGA CCCGGCTGGT GCTCGTGGTC GACCAATTCG AGGAACTCTT CGGTCGCGGC GTTTCGGCCG ACGCCACCCA ATTCATCCGG ACACTGCTGT CCGCCCTGCC GGATCAGCGC GGCACACAGT CGGCGTTCAC GACCGTGCTC ACGTTGCGTG CCGACTTCCT CGGCAACGCG CTCCAGGACC CGGTCATGGC CCAGGCGCTC GAGGACTCGG TCACCACCAT CGGCCAGATG GGTCGGGACC AGCTCCGGTC GGTGATACTG AGGCCCCTGC CGCCGGATGT CCGGTATGAG GCTGGCCTGG TCCAGCGGAT CCTCGGGGAC GTCGGCGAGG AGCCCGGCAG CCTGCCTCTC CTGGAGTTTG CGCTGACCCT GCTGTGGGAG AAACAGGAGC GAGGACTGCT TAGCCACGCG GCCTACGAAG AACTCGGCGG TGTCGACGGC GCACTGGCCA CGTACGCCGA ACGAGTCTTC TCGGAACAGG TGCGCCCAGA GGACCAGGAC GAAGCGCGGC GCCTCTTCAT CCAACTGGTC CGCCCCTCAG ACGCTGCCCC TGTGCGTCGC GTGGCGCGTC GCGCGGAGCT CGGTGAGGCC CGCTGGCAAC TCGGGCAGCG CATAGCCGCG ACTCGCCTCC TGGTCGCCGA CCGCGACGCC GCCGGCGCGG AGTCCGTGGA GCTCGTGCAT GAGGCCCTGA TCGACGGCTG GACCCGCCTC CACACCTGGG TGGCCGAGGA CATGGCCTTC CGCGCCTGGC AGGAGCAGCT GCGCGCCTCG GTTTCGGCCT GGGAGAAGGT GCGCCGCGAC ACGGGGGCAC TGCTGCGCGG AGCGCAACTC GCGGAGGCGG AGCGCTGGCT GCAGGAGCGA CAGGACGACC TCAGCGAGAC CGAACAGGAC TTCATCAAGC TGAGCAAGAC CTTCCGGGGA CGGTCGGTGC GCCGACTGCG CCTGGCCGTG GCCACGTTGA CCGTGTTGCT ACTCGTTGCG TCAGGGCTTG GCGTGGTGGT GACGAAGCAG CGCAATCAGG CTGCTCAACA GTCTCGAGTC GCAGAATCTA GTTTGCTAGC CAGTGAAGCG ATGTCCCTGG CCGGTTCAAG ACCGGATGTC GCCTTGGCGC TCGCGGCCGC TGCATACAGA CGGGCAAACT CTCCGGAGGC GACACGGATT CTGACGAGAA TGGCCACTGA TCACCAAGAC ACGGATGCTC TATTGCTCAC CTCCCTGCAA TCCGTAAGTG GCGTCCAATT CAATCCCACG GACTCGAACG TGCTCGCCGT GCAAGGCGAC GGCGGTATAA CGCTCTGGGA TGTGAAGAAC GACAAGCCTC TGTACGCCAC CGGACCATTG GACGAAGGCA TCGGCGGCAC AGCATTCAGC CACGACGGGA GGATGATCGC GTTAGCGCTA TGGGGCACCA AGTCGTGGGT GGCCTTGTGG TCTCCCGCTA ACGACCGGGT CGATGTTGTA TCCGCTGACG TGGACAGCGC CTACAGTGCC GGGACGCTTC AGTTCTCGCC AAACGATACT CTTGTGGCCT TCTGTACAGA CGAGGGAATA GAGTTGTGGA GGGCAGACAA CCCCCAACTC GAATCGTCAA TCCCTCTGAC AGACGCCTTA ACCTGTTCGT TCGGCTTCAC AGCCGACTCT AGTGTCCTGT ACATGGACGA CGGCGAAATC AAGCGCTGGG ACATCCGTAC GCGTGAAGTC GCAACCCATG GCCGGGTGGC AGAACCTGGT CAGGGTGCGA GTCTAAGCAT CGCCCCTAAT GGACAGGTTG CCCTCTGTGT TGACGGACAG GGCCACATGT TCTGGTGGGA TGTCGTGGGA AAAAAGCAGC TCGAGGACGC GTCACAGCTT GCGTTCACGG GATCGACGCC GACCTTCACA CCTGACAGTC AATGGGCCAT CACCCAGAGC AACATGGTAC AGGGGGGTGC CTATCTGATC GACGTATCCA GTCGCCAGTT GGCGGCGAGC TTCACCTTGC CGTGGCTGGG AGGTTTCCCG CAGGGTGCAT CGCTCAGCGG TGATGGACAG CTCATCGCCT TTCCCGCGGG CGGAGGTGCA GTTGGTCTTA CCGAGGTGGT GACCCACCGC GAAGTGCCGG TCGATGCCTC GCAGATTGCC CTTCCGAAGG ACGACCCCGA TCACATCATC ACGGTCACGT TCAGTGAATC TTCGACCGGC GGCGTCGAGA GTTATGCCTT GGACGGCAGT GAACGGGTGG AGCTCCTGCC TGCCTCGCCG CTTCCGTCCG ACTCTCAGGC ACCGCCATCA GCGCTCAGCC CCGACGGGCA CTACTACGCA CAGTGGGACG AGTCGTCGAA TCGGGTCGTC TTGACGGACA TATCGATCAC GCCGGTCGGG CAAGGTAGGC AGCTTGAGGG ACCCACCAGC ACACCTAAGG CCCTTGCGTT CGACCCCGGT GGGCAGTTCC TAGCCTCCGT CGACTCGCCG GACGGTACCC AATCCCTAGA GCTCAGCGTG TGGTCCGCTG AGACCGGAGC TCTCAGCTCC CACTTCCCGT TGCCCGAGGG GTACGTATTG GGAAATGAAG GTCTTGCCGT TCATCCCACG GGTCAAACCG TGGCCACCTA CGACTCCCAC GGCACAGTGA CACTGTGGGA GCATGCGGGG AAGAAGCTGA CAGAGCTGTC CGTCGACGGG GCTAGCGCAG TCAACTTCAG CCCCAATGGC AGGTGGTTGA GCGTCGTGAC GTCAGCCAAC ACCCGACTTT GGGACATGAA GGACACCAAG CAGTCGCCGC GACGATTGGC CGCAGGGCCG TCGAACTTGG TTGCGAGCCT CGCTCGGTTC AGTCCTGACG AAGAATACAT TGCGATCGCT ACCAGCGACG GCGCCAGCCC CTACATATCG GTGTGGAGGA CGGCTGACGG AGAATTTGTA GGTGAGGTCG CCAGTTATGC GTCGGACTAT CTCTTTACAC CCGACAACGA GCACCTCATC GTATCCGGTT CGGGGGTACA CGTCGTTTCG TTTACACCAT CGGCAGCTCT CGACACCATC TGCAGAATCC TGAGAGACCA TAGTTTGAGC GCCAAGGAGT GGGACCGGTA CGTGCTAGGG GTCGACTACA TCCCAGCATG CGGCTGA
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Protein sequence | MASAQARVEV WHPVDPSDRG DIAILSFGGE LPRGPVPARL VSSDDFWGHP FRTFGFPRRH DHGVWAAGVL RGSQGAGWVQ MEAISSGYPV EAGFSGGPVW DDELAGVVGM TVAADARSDL RTAYLIPAST LIDAFPPLAR HTLPPCPYRG LYPFRVQDAS LFFGREDLTD RLVREVTRRP LVAVVGPSGS GKSSVVFAGL LPQLLQQPGW VSVSMRPAQA SSPLHALAGA ILPVLEPDRS ETERLAAMDP LTDVLRDGHL PDVISRVLVR QHATRLVLVV DQFEELFGRG VSADATQFIR TLLSALPDQR GTQSAFTTVL TLRADFLGNA LQDPVMAQAL EDSVTTIGQM GRDQLRSVIL RPLPPDVRYE AGLVQRILGD VGEEPGSLPL LEFALTLLWE KQERGLLSHA AYEELGGVDG ALATYAERVF SEQVRPEDQD EARRLFIQLV RPSDAAPVRR VARRAELGEA RWQLGQRIAA TRLLVADRDA AGAESVELVH EALIDGWTRL HTWVAEDMAF RAWQEQLRAS VSAWEKVRRD TGALLRGAQL AEAERWLQER QDDLSETEQD FIKLSKTFRG RSVRRLRLAV ATLTVLLLVA SGLGVVVTKQ RNQAAQQSRV AESSLLASEA MSLAGSRPDV ALALAAAAYR RANSPEATRI LTRMATDHQD TDALLLTSLQ SVSGVQFNPT DSNVLAVQGD GGITLWDVKN DKPLYATGPL DEGIGGTAFS HDGRMIALAL WGTKSWVALW SPANDRVDVV SADVDSAYSA GTLQFSPNDT LVAFCTDEGI ELWRADNPQL ESSIPLTDAL TCSFGFTADS SVLYMDDGEI KRWDIRTREV ATHGRVAEPG QGASLSIAPN GQVALCVDGQ GHMFWWDVVG KKQLEDASQL AFTGSTPTFT PDSQWAITQS NMVQGGAYLI DVSSRQLAAS FTLPWLGGFP QGASLSGDGQ LIAFPAGGGA VGLTEVVTHR EVPVDASQIA LPKDDPDHII TVTFSESSTG GVESYALDGS ERVELLPASP LPSDSQAPPS ALSPDGHYYA QWDESSNRVV LTDISITPVG QGRQLEGPTS TPKALAFDPG GQFLASVDSP DGTQSLELSV WSAETGALSS HFPLPEGYVL GNEGLAVHPT GQTVATYDSH GTVTLWEHAG KKLTELSVDG ASAVNFSPNG RWLSVVTSAN TRLWDMKDTK QSPRRLAAGP SNLVASLARF SPDEEYIAIA TSDGASPYIS VWRTADGEFV GEVASYASDY LFTPDNEHLI VSGSGVHVVS FTPSAALDTI CRILRDHSLS AKEWDRYVLG VDYIPACG
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