| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3440 |
|---|
| Symbol | |
|---|
| ID | 8755121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 3619111 |
|---|
| End bp | 3620676 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Citrate transporter |
|---|
| Protein accession | YP_003410412 |
|---|
| Protein GI | 284991858 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGGAT TGATCGGGAT CATCCTGTCG CTGGTGCTGT TGATCGTGCT GGCCTACCGC
GGGATCAACG TGCTGATCCT CGCGCCGTTG ATGGCGCTGC TGGCCACCGC GTTCGCCGGG
GGCCTGCCAC TGTTGGCCAC CTACACCCAG GTCTTCATGC CAGCCCTGGG CAACTACGCC
ATCACCTACT TCCCGCTGTT CCTGCTCGGG GCCATCTTCG GCAAGCTGAT GGACGACTCC
GGCGCGGCCC GGGTGATCGC GCACTCCATC GTCGACAAGC TCGGCGGGAC GCGGGCGATC
CTCGCGATCG TCCTGTCCTG CGGCATCCTC ACCTACGGAG GCGTGTCGCT GTTCGTCGTC
GCCTTCGCGG TGTTCCCCAT CGCCGCGGCG CTGTTCCGCG AGGCCGGCGT CCCCAAGCGG
CTCATCCCGG CCACGATCGC GCTGGGTTCG TTCACCTTCA CGATGACCGC GCTGCCCGGC
ACCCCGGCCA TCCAGAACGC CATCCCGGCG CCCTTCTTCG GCACCAACGC CTTTGCTGCG
CCGGTCCTCG GCACGATCGC CGGTCTGATC ATGTTCGGTG GCGGCATGGC CTGGCTGACC
TTCCGGGCGC GGCGGGCCGC GGCGGCCGGG GAGGGGTACC TCGACGAACC CTCCCGCACC
CCGGACGACC CCGACGACAC CGCACCCGGT GCCGCCGGCT CGGGGGGGCC GCGCCCGCTG
CCTTCCGGGG CGGCCGGCCC GGGTGGGGGC GCGGCCGGCC CGGGCACCGG GGCGGCCGAC
CCCACCGGAG AGCTCGACCG GCCCGCCCAC AGCTCCGCGG CCGGCAGCTC CGATGTCGAC
GTGCAGACCG AGCAGCCGGC GAACCGGCCG TCGGTGGCGG TGTCCTACCT GCCGATCTTC
GTGGTCGTCG CCTTGAACTA CGTACTGGTG ACGTGGGTCT TCCCCGCCAT GGACACCGAC
TACCTGGCGC AGGACGCCTA CGGCGCCACC GACATCCAGA CCGTCGGCGG CATCTGGGCG
ATCATCGTCG CGCTGGTCAC CTCCTGCGCG CTCATCCTCG CCCTCAACTG GAAGCGGTTC
GCCAGCGCCA AGGAGTCGGT CAACGCCGGC ACGATGGGCT CGCTGCTGCC CATCTTCAAC
ACCGCCAGCG AGGTCGGCTA TGGCGCGGTC ATCGCCTCGC TGCCGGCCTT CCGCGTGGTG
CGCGACGCCG TGCTGGGAGT CTCGGACAAC CCCCTGATCT CCCTCGCCGT CTCGGTCAAC
GTGCTCGCCG GCATCACCGG CTCGGCTTCC GGCGGCATGA GCATCGCGCT GCAGACGCTC
GGTGAGACCT TCCGCGACCT CGCCGAGGCG CAGGGCATCA GCCTCGAGCT CATGCACCGG
GTGACCACCC TCGCCTCCGG TGGATTCGAC GCCCTGCCGC ACAACGGCGC CGTCATCACC
CTGCTCGCCA TCTGCGGGCT GACCCATCGG CAGTCCTACA AGGACATCGC CGTGGTGGCC
GTCGCCATCC CGGTGCTGGC CCTGATCGTG GTGATCGTGC TCGGCACCCT CTTCGGAGGC
TTCTGA
|
|---|
| Protein sequence | MLGLIGIILS LVLLIVLAYR GINVLILAPL MALLATAFAG GLPLLATYTQ VFMPALGNYA
ITYFPLFLLG AIFGKLMDDS GAARVIAHSI VDKLGGTRAI LAIVLSCGIL TYGGVSLFVV
AFAVFPIAAA LFREAGVPKR LIPATIALGS FTFTMTALPG TPAIQNAIPA PFFGTNAFAA
PVLGTIAGLI MFGGGMAWLT FRARRAAAAG EGYLDEPSRT PDDPDDTAPG AAGSGGPRPL
PSGAAGPGGG AAGPGTGAAD PTGELDRPAH SSAAGSSDVD VQTEQPANRP SVAVSYLPIF
VVVALNYVLV TWVFPAMDTD YLAQDAYGAT DIQTVGGIWA IIVALVTSCA LILALNWKRF
ASAKESVNAG TMGSLLPIFN TASEVGYGAV IASLPAFRVV RDAVLGVSDN PLISLAVSVN
VLAGITGSAS GGMSIALQTL GETFRDLAEA QGISLELMHR VTTLASGGFD ALPHNGAVIT
LLAICGLTHR QSYKDIAVVA VAIPVLALIV VIVLGTLFGG F
|
|---|
| |