| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3367 |
|---|
| Symbol | |
|---|
| ID | 8755048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 3537844 |
|---|
| End bp | 3540735 |
|---|
| Gene Length | 2892 bp |
|---|
| Protein Length | 963 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_003410340 |
|---|
| Protein GI | 284991786 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.737021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA CGGCCGACCA GCCCAGCGCC GATCAGGTGG TGGGCGACGT CCCGCCGCAC
CGCTACACGC CCGCCCTGGC GCAGCGGATC GAGCTGGCGT GGCAGGACCG CTGGGCGGCC
GAGGGGACGT TCCACACGCC GAACCCCGTC GGCCGGCTCA GCGAGGGCTT CGAGCGGGTC
GCCGACCGGC CGAAGGCCTT CGTGATGGAC ATGTTCCCGT ACCCCTCGGG CGCCGGCCTG
CACGTCGGCC ACCCGCTGGG CTACCTGGGC ACCGACGCGA CCAGCCGGTT CCGTCGCATG
GACGGCGCCA ACGTGCTGCA CCCGATGGGC TACGACGCCT TCGGCCTGCC CGCCGAGCAG
TACGCCGTCC AGACCGGGCA GCACCCGCGG ATCACCACCG AGGCCAACAT CGCGGCCATC
AAGGGGCAGC TGCGCCGGCT GGGCGTCGAC CACGACGAGC GCCGCACCTT CGCCACGATC
GACCCGGGCT ACTACAAGTG GACCCAGTGG ATCTTCCTGC AGATCTTCGG GTCCTGGTTC
GACGAGGACG CCGGGAGGGC GCGGCGGATC GAGGAGCTGG TCGCCGAGCT GGACGCCGGC
ACGCGGGAGC CGGCGCCGGG CACGAACGAG ACCGGCCGCC CGTGGGCCGA GCTGGACGGC
GTGGAGCGGC GGAGGGTCGT CGACGCGCAC CGGCTGGCCT ACCTGCACCA GGCGCCGGTG
AACTGGTGCC CGGGCCTGGG CACGGTGCTG TCCAACGAGG AGGTCACGCC CGACGGGCGC
TCCGAGCGCG GCAACTTCCC GGTGTTCCGG CGTCCGCTGA CCCAGTGGAT GATGCGGATC
ACCGCCTACG CCGAGCGACT GCTGGCCGAC CTGGACCGGC TGGACTGGTC GGACTCGGTG
AAGCAGATGC AGCGCAACTG GATCGGCCGC TCGACCGGTG CGCGGATCCG GTTCCCCGTC
GGGGACCGGA GCATCGAGGT GTTCACCACC CGGCCCGACA CGCTGTTCGG TGCCACCTAC
ATGGTGCTGG CGCCCGAGCA CCCGATGGTC GAGACGCTGA CCGCCACCGC GTGGCCGGAC
GGCACCGACC CGCGGTGGAC CGGCGGTGCG GCGACCCCGG CCGCGGCGGT GCGGGACTAC
CAGAGGCAGG CCTCTCGCCG CTCCGAGCTG GACCGGCAGA ACGAGGCGCG GGAGAAGACC
GGCGTCTGGC TGGGCGTCAC CGCGGTCAAC CCGGTCAACG GTCGCGAGCT GCCGGTGTTC
ATCGCCGACT ACGTGCTGAC CGGCTACGGC ACCGGCGCCA TCATGGCCGT TCCGGGCGAG
GACAACCGCG ACTTCGAGTT CGCGCAGGTC TTCGGCCTGC CGGTGGTCCG CACGGTGCAG
CCGCCGGAGG ACTTCGACGG CGGTGCCTAC ACCGGCGCCG GCGCGATGAT CAACTCGGCC
AACGACGAGA TCTCGCTGAA CGGCCTGGAC AAGGCGACCG CGATCGCGAC GATCACCGAC
TGGCTGGTGC AGCACGGCCA CGGCGAGGCG ACGACCACCT ACAAGCTGCG CGACTGGCTG
TTCAGCCGGC AGCGCTACTG GGGCGAGCCG TTCCCGGTGG TCTACGACGA GGACGACCTG
CCGGTCGCCG TCCCGGAGTC GATGCTGCCG GTGCTGCTGC CCGAGGTCGA CGACTACTCG
CCCAAGACCT TCGACGACGA CGACGCCGAC TCCGCGCCGG AGCCGCCGCT GTCCCGGGTC
ACCGACTGGA CGACGGTCGA GCTGGACCTG GGCGAGGGCC TGCGGAAGTA CCGGCGCGAG
ACCAACACGA TGCCCAACTG GGCCGGCTCC TGCTGGTACT ACCTGCGCTA CCTGGACCCC
TCCGACGACA CGCAGATGGT CGACCCGGAG CTGGAGCGCT ACTGGCTGGG TCCGCGGGAG
CCCGGCGACG TCGGTGGCGT CGACCTGTAT GTAGGCGGCA TGGAGCACGC CGTGCTGCAC
CTGCTGTACG CCCGCTTCTG GCACAAGGTG CTGCACGACC TGGGCTACGT CAGCAGCGAG
GAGCCGTTCC GGCGGCTGGT CAACCAGGGC TACATCTCCG CCTACGCCTA CACCGACGAG
CGCGGCTTCT ACGTGCCCGC CGCCGAGGTG GAGGAGCGCG ACGGGCAGTT CCTCCACGAG
GGCCGGCCGG TCAACCGTGA GTACGGGAAG ATGGGCAAGA GCCTGAAGAA CATGGTGACG
CCCGACGAGA TGATCGGCGC GTACGGCGCG GACACGCTCC GGGTCTATGA GATGTCGACC
GGCCCGCTCG AGCAGTCCCG GCCGTGGGAG ACCAAGGCCG TCGTCGGTTC GCAGCGGCTG
CTCCAGCGGA TCTGGCGGGT CGTCGTCGAC GAGGAGACCG GCGCGGTCCG GGCGGCGGAC
GACATCCAGC CGGCCGAGGA GACGCTGCGG GCGCTGCACC GGGCGATCGC CGGGGTCCGG
GACGGGATGT CGACGCTGCG GTTCAACATC TCGATCGCCC GGATCACCGA GCTGACCAAC
CACCTGACCC AGGCCTACGG GGCGGACTCC GCGGTGCCGC GGTCGGTGGC CGAGCCGCTG
GTGCTGCTGG TCGCGCCGCT GGCCCCGCAC ATCGCCGAGG AGCTGTGGGC GAGGCTCGGC
CACGGCGAGT CGCTGGCCTG GCACCCGTTC CCGGTGGCCG ACGAGCGCTG GCTGGTCGAG
GACACCGTGC AGGTCGCGGT CCAGGTCAAC GGCAAGGTGC GGGCCCAGGT GACGGTGCCG
GCCGACGCCG ACGCCGCCGC GCTGGAGGCC GCGGCCCGGG CCGACGACAA GGTCGCCGCG
CACCTGGACG GGAAGACGGT GCGCCGCGTC GTCGCCGTCC CCGGCCGGCT GGTCAACTTC
GTCCTCGGCT GA
|
|---|
| Protein sequence | MSQTADQPSA DQVVGDVPPH RYTPALAQRI ELAWQDRWAA EGTFHTPNPV GRLSEGFERV
ADRPKAFVMD MFPYPSGAGL HVGHPLGYLG TDATSRFRRM DGANVLHPMG YDAFGLPAEQ
YAVQTGQHPR ITTEANIAAI KGQLRRLGVD HDERRTFATI DPGYYKWTQW IFLQIFGSWF
DEDAGRARRI EELVAELDAG TREPAPGTNE TGRPWAELDG VERRRVVDAH RLAYLHQAPV
NWCPGLGTVL SNEEVTPDGR SERGNFPVFR RPLTQWMMRI TAYAERLLAD LDRLDWSDSV
KQMQRNWIGR STGARIRFPV GDRSIEVFTT RPDTLFGATY MVLAPEHPMV ETLTATAWPD
GTDPRWTGGA ATPAAAVRDY QRQASRRSEL DRQNEAREKT GVWLGVTAVN PVNGRELPVF
IADYVLTGYG TGAIMAVPGE DNRDFEFAQV FGLPVVRTVQ PPEDFDGGAY TGAGAMINSA
NDEISLNGLD KATAIATITD WLVQHGHGEA TTTYKLRDWL FSRQRYWGEP FPVVYDEDDL
PVAVPESMLP VLLPEVDDYS PKTFDDDDAD SAPEPPLSRV TDWTTVELDL GEGLRKYRRE
TNTMPNWAGS CWYYLRYLDP SDDTQMVDPE LERYWLGPRE PGDVGGVDLY VGGMEHAVLH
LLYARFWHKV LHDLGYVSSE EPFRRLVNQG YISAYAYTDE RGFYVPAAEV EERDGQFLHE
GRPVNREYGK MGKSLKNMVT PDEMIGAYGA DTLRVYEMST GPLEQSRPWE TKAVVGSQRL
LQRIWRVVVD EETGAVRAAD DIQPAEETLR ALHRAIAGVR DGMSTLRFNI SIARITELTN
HLTQAYGADS AVPRSVAEPL VLLVAPLAPH IAEELWARLG HGESLAWHPF PVADERWLVE
DTVQVAVQVN GKVRAQVTVP ADADAAALEA AARADDKVAA HLDGKTVRRV VAVPGRLVNF
VLG
|
|---|
| |