| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3279 |
|---|
| Symbol | |
|---|
| ID | 8754960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 3449525 |
|---|
| End bp | 3450835 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | Cupin 4 family protein |
|---|
| Protein accession | YP_003410255 |
|---|
| Protein GI | 284991701 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGACCGAGG ACCCCACCGC CCAGGGCCGG CCGGGCGACC GGCCGGCCCT GGGTCGGTGC
ACCGCTCTCG ACCCGCGGGT CTTCGCCGAG GAGTACTGGG CCCGCCGGCC GCTGCTGACC
CGCGCCGAGG AGACGGGCGG CTCCTTCGCC GACCTGCTCG ACCTCGCCGC GGTCGACGAG
CTGCTGTCCC GCCGCGGGCT GCGCACCCCG TTCCTGCGGA TCGCCAAGGA CGGCGCGGTC
GTCGACCCCA AGCGCTTCAC CACGTCCGGC GGCGCCGGCG CCGAGGTCGC CGACCAGGTC
TCCTCCGACG CGGTGCTGCG GCTGTTCGCC GACGGCAGCA CCGTCGTCCT GCAGGGTTTG
CACCGGCTGT GGCCGCCGCT GATCGAGTTC GCCGACCAGC TGGCCGCCGA CCTCGGCCAC
CCCACGCAGG TCAACGCCTA CGTCACCCCG CCGTCCTCGC GCGGCTTCTC CCCGCACTAC
GACGTCCACG ACGTCTTCGT CCTGCAGGTG GCCGGCGAGA AGCGCTGGCG CATCCACGAG
CCGGTGCTGA CCGACCCGCT GCGCACCCAG CCGTGGAACG AGCGGGGCGC CGCGGTGGCC
GCCGCCGCCG AGCGCGAGCC GCTGATCGAC GCGGTGCTGC GCCCCGGCGA CGCCCTCTAC
CTGCCACGCG GCTACCTGCA CTCGGCGACC GCGCTCGGCG CCATCAGCGC GCACCTGACC
GTCGGCATCC ACTCGGTGAC CCGGTGGGCG GCCGCGGAGT CCGCCCTGGA CCTGGTCCGC
GTGCTCGCCA CGGAGGACCC GCAGCTGCGC CGCTCGCTGC CGCTGGGCGT CGACCTCGCC
GACCCGGCCG CGGTCGCCGA CGACGTCGCG ACGGTCGTCA CCGCGCTGAA GGGCTGGCTG
GACCGCGTCG ATCCCGCCGA GGTCGCCGAC CGGCTGCGGG CCCGCACCTG GTCGCAGGTC
CGCCCGGAGC CGGTGGCCCC GCTGGCCCAG GCGACCGCGG CGGCCGCCCT CTCCCCCGAC
ACCGTGCTCC GGCTGCGCCG CCGCCTGCGC TGCCAGCTGC GCGAGGCCGC CGACGGACGG
GTCACCCTGG TCGCGGGACG ACGGTCCCTG GAGCTGCCCG CCGAGACGCG GCCGGCGGTG
GCCGGGCTGC TGGCCGCCGG CGAGCTCAAG GTCGCCGACC TGCCCGGGCT CGACCCCGCC
GACCAGCTCA CCCTGGGTCG GCGGCTGGTG ACCGAGTCGA TCGCCACCGT GCCCGGTGCG
ACCGCGGAGG ACCATGGGGG GCGTGAGCGC GCGCCCGGGA ACGGATCGTG A
|
|---|
| Protein sequence | MTEDPTAQGR PGDRPALGRC TALDPRVFAE EYWARRPLLT RAEETGGSFA DLLDLAAVDE
LLSRRGLRTP FLRIAKDGAV VDPKRFTTSG GAGAEVADQV SSDAVLRLFA DGSTVVLQGL
HRLWPPLIEF ADQLAADLGH PTQVNAYVTP PSSRGFSPHY DVHDVFVLQV AGEKRWRIHE
PVLTDPLRTQ PWNERGAAVA AAAEREPLID AVLRPGDALY LPRGYLHSAT ALGAISAHLT
VGIHSVTRWA AAESALDLVR VLATEDPQLR RSLPLGVDLA DPAAVADDVA TVVTALKGWL
DRVDPAEVAD RLRARTWSQV RPEPVAPLAQ ATAAAALSPD TVLRLRRRLR CQLREAADGR
VTLVAGRRSL ELPAETRPAV AGLLAAGELK VADLPGLDPA DQLTLGRRLV TESIATVPGA
TAEDHGGRER APGNGS
|
|---|
| |