Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3267 |
Symbol | |
ID | 8754948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 3434981 |
End bp | 3436552 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | |
Product | UDP-N-acetylmuramyl-tripeptide synthetase |
Protein accession | YP_003410243 |
Protein GI | 284991689 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.997765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCCAGA GCGGGAAGGG GACGGCGTCC CGGCCGACGG GGACCGGCCC CCTGACCCTC GCCGATCTCG CCGACCTGCT CGGCGCGCCC GTCCAGGGCG ACGCCGGCAC CGCGGTCACC GGCGTGACGC TGGCCTCCGG GGAGGTCGGC CCCGGCGACC TCTACGCCGC CCTGCCCGGC GCCCGCACGC ACGGCGCCCG GTACGCGGCC GACGCGGCGG CGCGCGGTGC GGCCGCCGTC CTCACCGACC CGACCGGCCG CGAGGAGGCC GCCGCCACCG GTCTGCCGGT GTGCGTCGTC GACGATCCGC GCGGCCTGCT CGGCGCGGTG GCGGCGCGGG TCTACGGCGA GCCGGCCCGG CGGCTGCAGG TCATCGGGAT CACCGGCACC AACGGCAAGA CGACGACGAG CTACCTGGTC GAGGCGGGCC TGGCCGCCGC CGGCCGCGGC ACCGGCCTGG TCGGCACCGT CGAGACGCGC ACCCGCGGTC GCGCCGCCGA CGGCACGCCG ACGGTCACCA CCCTGCCCAG CGTGCGGACG ACACCGGAGG CGCCGGCCCT GCACGCGCTG CTGGCCCGGA TGGCCGACTC CGGCGTGCAG ACGGTCGTCA TGGAGGTGTC CAGCCACGCG CTGGTGCTCG GCCGGGTGGG CGGCATCCCG TTCGCCGCGG CCGGCTTCAC CAACCTCGGC CGCGACCACC TGGACTTCCA CACGGACATC GAGGACTACT TCCTCGCCAA GGCGCGGCTG TTCGACGGCC GCGCCGCCGT CGAGGTGGTC GACGTCGACG ACCCGTACGG GCGGCGGCTG GCCGGCATGC TCGGCGACCG CCGCGCGGTC ACCGTCTCCA CCCAGGGCGC CGACGCCGAC TGGACGGCGA CCGGCCTGGG CCCCGCCCCC GGCGGCGGGA CGGCGTTCAC CCTGTCCGGC CCGGGCGGGC GCAGCTGGCC GGCGCGGGTG CGGCTGCCCG GGGCGTTCAA CGTCGCCAAC GCCGTCCTGG CCGTGGCGCT GCTCGACGCG GTCGGCGTGC CGGTGGAGAC GGCGCTGACC GGGCTGGCCG AGACGGTCGT GCCCGGCCGG ATGGAGCCGG TGGACGCCGG CCAGCCGTTC GTCGCCGTCG TCGACTACGC GCACACCCCC GACGCCGTCG CCACCGCCCT CGCCGCGCTG CGCGCAGCCA CCCCCGGGCG GGTCCTCACC GTGCTCGGCT GCGGCGGTGA CCGCGACCCC GGCAAGCGGG CGGCGATGGG GGAGGCCGCG GCGCGCGGCA GCGACCTGCT CGTCGTCACC GACGACAACC CGCGCTCGGA GGACCCCGCC GCCATCCGCG CGGCGATGCT CGCCGGCGTC CCCGCAGACC GGCGCGGCGA CGTGGTCGAG GTCGGCGACC GGCGCGCCGC GATCGCCGAG GCGGTCGCCC GCGCCCGGCC CGGCGATGCC GTCCTGGTGG CCGGCAAGGG CCACGAGACC GGCCAGGACG TGGCCGGCAC CCTGCACCCC TTCGACGACC GCGCCGTGCT GCGCGAGGCC CTGGCGCAGC GTGTGCCGGC CGGAGTGGAG CCTCCAGCGT GA
|
Protein sequence | MSQSGKGTAS RPTGTGPLTL ADLADLLGAP VQGDAGTAVT GVTLASGEVG PGDLYAALPG ARTHGARYAA DAAARGAAAV LTDPTGREEA AATGLPVCVV DDPRGLLGAV AARVYGEPAR RLQVIGITGT NGKTTTSYLV EAGLAAAGRG TGLVGTVETR TRGRAADGTP TVTTLPSVRT TPEAPALHAL LARMADSGVQ TVVMEVSSHA LVLGRVGGIP FAAAGFTNLG RDHLDFHTDI EDYFLAKARL FDGRAAVEVV DVDDPYGRRL AGMLGDRRAV TVSTQGADAD WTATGLGPAP GGGTAFTLSG PGGRSWPARV RLPGAFNVAN AVLAVALLDA VGVPVETALT GLAETVVPGR MEPVDAGQPF VAVVDYAHTP DAVATALAAL RAATPGRVLT VLGCGGDRDP GKRAAMGEAA ARGSDLLVVT DDNPRSEDPA AIRAAMLAGV PADRRGDVVE VGDRRAAIAE AVARARPGDA VLVAGKGHET GQDVAGTLHP FDDRAVLREA LAQRVPAGVE PPA
|
| |