| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3223 |
|---|
| Symbol | |
|---|
| ID | 8754904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 3386240 |
|---|
| End bp | 3387892 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
|---|
| Protein accession | YP_003410199 |
|---|
| Protein GI | 284991645 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACA CCGACGTCGT CGTGGTGGGG GCGGGGCTGG CCGGGCTGGT CGCCGCCGCG
GAGCTGGCCG ATGCGGGGAA GCGGGTGGTC CTGCTGGACC AGGAGCCCGA GCAGTCCCTC
GGCGGGCAGG CCTGGTGGTC CTTCGGCGGG CTGTTCCTCG TCGACTCGCC CGAGCAGCGC
CGGCTGCGGG TGCGCGACTC GCTCGAGCTG GCCAGGCAGG ACTGGTCCGG CACTGCCGGC
TTCGACCGCG CGGAGGACCA CTGGCCGCGC CGGTGGGCCG AGGCCTACCT GCAGTTCGCC
GCGGGGGAGA AGCGGGCGTG GCTGCGCGAG CAGGGCGTCG GCTTCTTCCC GGTCGTCGGC
TGGGCCGAGC GCGGCGGCTA CACCGCCACC GGCCACGGCA ACTCGGTGCC GCGGTTCCAC
ATCGTCTGGG GCACCGGGCC GGGCCTCGTC GAGCCCTTCG CCCGCCGGGT GCGCGCCGCG
GCCGACCGGG GCGTGCTGCA GCTGCTGTTC CGCCACCGCG TCGACGAGCT GGTGGTCAGC
GGCGGCGCGG TCACCGGCGT CCGCGGCACC GTCCTCGAGC CCAGCGACGT CGCCCGCGGT
GAGCCCAGCT CACGCGACGC GGCCGGCGAG TTCGAGGTCT CGGCGCAGGC CGTCGTCGTC
ACCTCCGGCG GCATCGGCGG CAACCACGAG CTGGTCCGGC AGAACTGGCC CGCCCGCCTG
GGCCCGGCGC CGCAGCGGCT GCTCTCCGGC GTCCCCGCGC ACGTCGACGG CCGGATGCTG
CAGGCCACGG AGGCCGCCGG GGGGAACCTG ATCAACCGCG ACCGGATGTG GCACTACACC
GAGGGCATCG CCAACCACTC GCCCGTCTGG CAGCGGCACG GCATCCGGAT CCTGCCCGGG
CCGTCGTCGC TGTGGCTCGA CGCGACCGGC AAGCGGCTCC CGGTGCCGCT GTTCCCCGGC
TTCGACACCC TGGGCACGCT CGCCCACATC GGGCAGACCG GGTACGAGCA CACCTGGTTC
GTCGCCACGC ACAAGATCGT GGAGAAGGAG TTCGCGCTGT CGGGCTCCGA GCAGAACCCC
GACCTCACCG GCAGGGACGT CAAGCTGCTG CTCGGCCGGG TCCGGTCCGG CGTCGCCCCG
CCGGTGCAGG CCTTCCTCGA CGCGGGGGAG GACTTCGTCG TCGCCCGCAC CCTGCCCGAG
CTGGTCGCCG GCATGAACCG GGTCACGGGC GGGACCCCCG AGCTGAGCCT GGCCGACGTC
GAGCGCGAGG TGGTGGCCCG CGACCGCGAG GTCGCCCACC CCTTCACCAA GGACCTGCAG
GTCACCGCGA TCCGCGGCGC CCGCAACTAC CTCGGCGACA AGCTGATCCG AGTGGCCCCG
CCGCACCGGC TGCTCGACCC CGAGGCCGGG CCGCTGATCG CCGTCCGGCT CAACCTGATC
ACCCGCAAGA CCCTCGGCGG GCTGGAGACC GACCTGTCCG GCCGCGTCCT GCGGGCCGGT
GGTGAGGTCT TCCCCGGCCT CTACGCCGCG GGCGAGGTCG CGGGCTTCGG CGGCGGCGGC
ATGCACGGCT ACCGCTCGCT GGAGGGCACC TTCCTCGGCG GGTGCCTGTT CAGCGGCCGG
GTCGCCGGCC GGGCGCTCGC GGCCGCGCTG TGA
|
|---|
| Protein sequence | MTDTDVVVVG AGLAGLVAAA ELADAGKRVV LLDQEPEQSL GGQAWWSFGG LFLVDSPEQR
RLRVRDSLEL ARQDWSGTAG FDRAEDHWPR RWAEAYLQFA AGEKRAWLRE QGVGFFPVVG
WAERGGYTAT GHGNSVPRFH IVWGTGPGLV EPFARRVRAA ADRGVLQLLF RHRVDELVVS
GGAVTGVRGT VLEPSDVARG EPSSRDAAGE FEVSAQAVVV TSGGIGGNHE LVRQNWPARL
GPAPQRLLSG VPAHVDGRML QATEAAGGNL INRDRMWHYT EGIANHSPVW QRHGIRILPG
PSSLWLDATG KRLPVPLFPG FDTLGTLAHI GQTGYEHTWF VATHKIVEKE FALSGSEQNP
DLTGRDVKLL LGRVRSGVAP PVQAFLDAGE DFVVARTLPE LVAGMNRVTG GTPELSLADV
EREVVARDRE VAHPFTKDLQ VTAIRGARNY LGDKLIRVAP PHRLLDPEAG PLIAVRLNLI
TRKTLGGLET DLSGRVLRAG GEVFPGLYAA GEVAGFGGGG MHGYRSLEGT FLGGCLFSGR
VAGRALAAAL
|
|---|
| |