Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3082 |
Symbol | |
ID | 8754758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 3233321 |
End bp | 3234874 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_003410062 |
Protein GI | 284991508 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.720655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACGACG CACCGGCACG GCCCCCTGCC CGCCGCCTCC GGGTCGCGGT CTACTCCGGG GTCCTGGCGG CCGCGCTGGC CGCCGCGCAC CTCCTCGTCG CGCGGGTCTC GTCGGGCGGC TCCGAGCAGG TGCTGCTGCA CGTGCTGCTC AGCGGCACCG CGGCTGTCGG CGCCGCCGCC CTCGCCGCCC AGCGGGTGCG GCGCACCGAG GCCGACCTGG CCACGCTGGC CTTCTCCGAC GTCCTGACCG GGCTGGCCAA CCGGGCGCTG TTCACCGACC GGCTCGAGCT CGCGCTGCGC CGCACCGCGC GCAGCGGCGG CGAGGTGGCC GTCGTCTTCC TCGACCTCGA CGGCTTCAAG GCCGTCAACG ACAGCCTCGG TCACGCCGCC GGGGACCGGC TCATCCGCGA GGTGGGCACG CTGCTGCAGT CCGCCGTCCG CTCCGAGGAC ACCCTCGCCC GCCTCGGCGG CGACGAGTTC GCGATCCTCG TCGAGCGCTC GCCCGGCGTC GAGGAAGCCA CCCGGATCGC CGAGCGGGCG CTCGCCGCGC TCGCCGGGCC GGTCGACCTC GGAGGGCAGC GGGTCACCGT CTCGGCGAGC ATCGGCATCG CCACCGGGGA CGTCGCGGCG ACGGCGTCGT CCCTGCTGCG GGACGCCGAC AACGCCATGT ACTGGGCCAA GGGTGCCGGC GCCGGCCGCT ACGTCGTGTT CAACCCGCAG ATGCGCTCGG CCGCCGCGGA ACGCCGCCAG CTGGAGACCG ACCTGTGGGC CGCTGTGGAC GGGGAGCAGT TCCGGCTGGT CTACCAGCCC GTCGTCGACC TGGGCAGCGA GCGGGTCACC GGCTTCGAGG CGCTCATCCG CTGGGACCAC CCGGTCCTCG GCGTGGTGCT GCCGGAGCAG TTCCTGCCGG TGGCCGAGGA GATCGGGCTG GTCCCCGACA TCGGCCGGTG GGTCATCACC CAGGCGTGTG CGGCCGCGGC CGGCTGGCGC CGCGACCACC CGACCGCGGC CGGCCTGTCG ATGGCGGTCA ACGTCTCGCC GTCCCAGCTC GGGTCGCCGG GCCTGCTCGC CGACGTCCGG ACGGCGCTGG AGGCCAGCGG ACTGCCGCCG TCTGCGCTGG TCCTGGAGCT CACCGAGTCG GTGCTGGTGC GCGATCCGGT GCTGGCCGCC GAGCGGCTGC ACGAGCTGCG CAGCCTGGGG GTGAAGGTCG CGCTCGACGA CTTCGGCACC GGCTACTCCT CGCTGTCGCA CCTGCGGCAG TTCGCCGTCG ACATCCTCAA GATCGACCGG TCGTTCGTGG GCAGCATCGA CGAGGCCGAG GCGATGCCGG CCATCCTGCG CGGGCTGATC GACCTGGGGC ACACCCTCGA CCTGCAGATC GTCGCCGAGG GCATCGAGCT GGAGCGCCAG CGCACGCAGC TGCGCGACGG GCAGGTCGGG CTCGCCCAGG GCTACCTGTT CGCCGCGCCG CTGGAGCACA CGGACGCCGA GCTGCTGCTG CTCGGCGGCG TCAGCACGCC CGCCGAGGGG ACGGGCACCG CTACCCCGGC CTGA
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Protein sequence | MDDAPARPPA RRLRVAVYSG VLAAALAAAH LLVARVSSGG SEQVLLHVLL SGTAAVGAAA LAAQRVRRTE ADLATLAFSD VLTGLANRAL FTDRLELALR RTARSGGEVA VVFLDLDGFK AVNDSLGHAA GDRLIREVGT LLQSAVRSED TLARLGGDEF AILVERSPGV EEATRIAERA LAALAGPVDL GGQRVTVSAS IGIATGDVAA TASSLLRDAD NAMYWAKGAG AGRYVVFNPQ MRSAAAERRQ LETDLWAAVD GEQFRLVYQP VVDLGSERVT GFEALIRWDH PVLGVVLPEQ FLPVAEEIGL VPDIGRWVIT QACAAAAGWR RDHPTAAGLS MAVNVSPSQL GSPGLLADVR TALEASGLPP SALVLELTES VLVRDPVLAA ERLHELRSLG VKVALDDFGT GYSSLSHLRQ FAVDILKIDR SFVGSIDEAE AMPAILRGLI DLGHTLDLQI VAEGIELERQ RTQLRDGQVG LAQGYLFAAP LEHTDAELLL LGGVSTPAEG TGTATPA
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