Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3044 |
Symbol | |
ID | 8754720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 3190704 |
End bp | 3192089 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003410025 |
Protein GI | 284991471 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0440547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGCCC TCACCCCCAC CACCCGACAG CCGACCGCGC CGGTCACCGC CGCGCCGCGC CGCGGTCGCT GGATCGACGA CTGGCGCCCG GAGGACCCCG CCTTCTGGGA GTCCGCGGGC AAGCCGGTCG CCCGCCGCAA CCTGTTCTTC TCGGTCTTCT CCGAGCACAT CGGCTTCTCG ATCTGGAGCC TGTGGTCGGT GCTCGTGCTG TTCCTGCCCG AGGCCGTGTA CGGCATCGAC CCGGCCGGGA AGTTCCTGCT GACCACGCTG CCGACGGCGC TGGGCGCATT CGTCCGGCTG CCCTACACCT TCGCCGTCGC GAGGTTCGGC GGCCGCAACT GGACGATCGT CAGCGCCGCG CTGCTGCTGG TGCCCACGAT CGCCACGGCC GTCGTCCTGG AGCCCGGCGT CGACTACACG ACCCTGCTCG TCGTCAGCTG CCTCGCCGGT GTCGGTGGCG GCAACTTCGC CAGCTCCATG GCCAACATCA ACGCCTTCTA CCCGAACCGG CTCAAGGGCT GGGCGCTCGG CCTCAACGCC GGCGGCGGCA ACCTCGGCGT CCCCGTCGTC CAGCTGGTGG GCCTGCTCGT GCTGGCCACC GCGGGCGCCG AGCACCCGCG GCTGGTCCTG CTGGTCTACA TCCCGCTGAT CGCCGTCGCC GCCGTCGGTG CGGCCCTGCT CATGGACAAC CTGACGACGG CGCGCAACCA GCCGCGGGCC ATGCGCGAGG CCACCCGCGA GCCGCACACC TGGATCATGT CCTTCCTCTA CATCGGCACC TTTGGCTCGT TCATCGGCTT CGGGTTCGCC TTCGGCCAGG TGCTGCAGAA CCAGTTCACC GGCGACTTCG CCACGCCCCT CGCCGCCGCG TCGCTGACCT GGCTCGGCCC GCTGCTGGGC TCGCTGATCC GCCCGCTCGG CGGCTCGCTG GCCGACCGCT TCGGCGGTGC CCGCATCACG TTCTGGAACT TCGCGGCGAT GGCCGTCGGC GCCGGGATCG TGTGGAGCGC CAGCCAGGTG GGGTCGCTGC CGCTGTTCGT CGTCGGCTTC GTGTCGCTGT TCGTGTTCAG CGGTCTCGGC AACGGCTCGA CCTACAAGAT GATCCCGGCG ATCTTCCGCA CCCAGGCGCA GCAGCGGGTG GCCGCCGGGG AGGACGGCGC CGTCGCCGAC CGGCACGCGC TGCGCATGTC CGGCGCGCTC ATCGGCATCG CCGGCGCGGT CGGCGCCTTC GGCGGCGTGC TGGTCAACCT GGCCTTCCGC CAGTCGTTCC TGGCCACCGG CACCGGCGAC TCGGCCTATC TGGTGTTCAT CGCCTTCTAC CTGGTCTGCC TCGCCGTCAC GTGGGCGGTC TACCTGCGGC CCCGGGCGCC CATGTCCGGG GTGTGA
|
Protein sequence | MAALTPTTRQ PTAPVTAAPR RGRWIDDWRP EDPAFWESAG KPVARRNLFF SVFSEHIGFS IWSLWSVLVL FLPEAVYGID PAGKFLLTTL PTALGAFVRL PYTFAVARFG GRNWTIVSAA LLLVPTIATA VVLEPGVDYT TLLVVSCLAG VGGGNFASSM ANINAFYPNR LKGWALGLNA GGGNLGVPVV QLVGLLVLAT AGAEHPRLVL LVYIPLIAVA AVGAALLMDN LTTARNQPRA MREATREPHT WIMSFLYIGT FGSFIGFGFA FGQVLQNQFT GDFATPLAAA SLTWLGPLLG SLIRPLGGSL ADRFGGARIT FWNFAAMAVG AGIVWSASQV GSLPLFVVGF VSLFVFSGLG NGSTYKMIPA IFRTQAQQRV AAGEDGAVAD RHALRMSGAL IGIAGAVGAF GGVLVNLAFR QSFLATGTGD SAYLVFIAFY LVCLAVTWAV YLRPRAPMSG V
|
| |