Gene Gobs_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGobs_3007 
Symbol 
ID8754680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeodermatophilus obscurus DSM 43160 
KingdomBacteria 
Replicon accessionNC_013757 
Strand
Start bp3145035 
End bp3146222 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content72% 
IMG OID 
ProductThiamin pyrophosphokinase catalytic region 
Protein accessionYP_003409988 
Protein GI284991434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.64327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCG GCTCCCTCCG CCGTGGCCGG GCGCCGGAAG CGGCCCCCGG AGTGACCGGC 
ACCGTGCGGC TCGACCGCCG CACCAAGAAC CTCACCAAGC GGCTGCGGCC CGGTGACGTC
GCGGTCATCG ACCACGTCGA CATCGACCGG GTCAGCGCCG ACTCGCTGGT CGCCTGCAGG
GTTGCCGCGG TGGTCAACGC CGCGCCCAGC ACCTCCGGCC GCTACCCCAA CCTCGGCCCC
GAGATCCTGG TCGACGCCGG CATCCCGCTC GTCGACGGGG TGGGCAAGGA GGTGCTGTCG
GCCGTCAAGG AGGGGACGGC GGTCCGCGTC GACGGCAACC GGCTGCTGCG GGAGGACGGC
ACCGTCGTCG CCGAGGGCAC CGAGCAGACC GCGGAGTCCG TCGCCGAGGC GATGGCCGAG
GCCCGCGCCG GGCTGTCGGT GCAGTTGGAG GCGTTCGCCA CCAACACGAT GGAGTACATG
AAGCGCGAGC GCGCGCTGCT GCTCGACGGA GTCGGCGTCC CGGACGTAGC CACGCAGATC
GAGGGCCGGC ACGTGCTGGT CGTCGTCCGC GGCTACGACT ACAAGGAGGA CCTGCAGGCG
CTGCGGTCCT ACATCCGCGA CTACCGGCCG GTGCTCATCG GCGTGGACGG CGGCGCGGAC
GCGCTCGTCG AGGCCGGCTA CCGGCCCGAC ATGATCATCG GCGACATGGA CTCGGTGAGC
GACGACGTCC TGAAGAGCGG CGCCGAGGTC GTCGTGCACG CCTACGCCGA CGGCCGCGCC
CCCGGCCTGG CCCGCGTGCA GGACCTCGGG GTCGAGGCGA TCACCTTCCC CGCCGCGGCC
ACGAGCGAGG ACATCGCGAT GCTGCTGGCC GACGAGAAGG GCGCCACGCT CATCGTCGCC
GTCGGCACCC ACGCCACGCT CGTCGAGTTC CTCGACAAGG GCCGCGGCGG CATGGCCTCC
ACCTTCCTCA CCCGGCTGCG GCTGGGCGGC AAGCTGGTCG ACGCCAAGGG GGTCAGCCGG
CTGTACCGCA GCCGCATCTC GACCCTGACG CTCGTCGTCC TGGTGCTCGC CGCCCTGGTG
GCCATCGGCT CGGCCCTCGC CGTCTCCGCG GTCGGCCGCG TCTACCTCGA CCTGACGGTC
GACCAATGGA ACAGCTTCGT GTTCTGGCTG GAGAACCTCT TCTCGTGA
 
Protein sequence
MRIGSLRRGR APEAAPGVTG TVRLDRRTKN LTKRLRPGDV AVIDHVDIDR VSADSLVACR 
VAAVVNAAPS TSGRYPNLGP EILVDAGIPL VDGVGKEVLS AVKEGTAVRV DGNRLLREDG
TVVAEGTEQT AESVAEAMAE ARAGLSVQLE AFATNTMEYM KRERALLLDG VGVPDVATQI
EGRHVLVVVR GYDYKEDLQA LRSYIRDYRP VLIGVDGGAD ALVEAGYRPD MIIGDMDSVS
DDVLKSGAEV VVHAYADGRA PGLARVQDLG VEAITFPAAA TSEDIAMLLA DEKGATLIVA
VGTHATLVEF LDKGRGGMAS TFLTRLRLGG KLVDAKGVSR LYRSRISTLT LVVLVLAALV
AIGSALAVSA VGRVYLDLTV DQWNSFVFWL ENLFS