Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_2979 |
Symbol | |
ID | 8754652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 3115193 |
End bp | 3116080 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | transposase IS4 family protein |
Protein accession | YP_003409960 |
Protein GI | 284991406 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.859253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCGAAT GCCTGGATCG GGAGGCGTAT CCCAGTTCGC TGACCGATGC GCAGTGGGCG GTGGTCGAGC CGCTGCTGCC GGTTCGTGAT CCTCGGCGCG GTGGGCGGCC GCTGACGTAC GACCGCCGGC TGGTGCTCGA CACGATCCTG TACGTGCTGG TCAGTGGCTG CGCCTGGCGT CAGGTGCCGC ATGACCTGGC GCCCTGGGAC GCGGCCTATC GATGGTTCCG CGCCTGGAGC GCCGATGGCA CCTGGGACCG GGTGCACGAC CAGTTGCGCG ATCGACTGCG GGCCCGGGAG GGACGCACCG TGCAGCCGTC GGCGGCGGTG CTGGATTCGC AGTCCGCGCG CAGCGCCGAG GGCGGGGAGG CCATCGGCTA CGACGCCGGC AAGCGGGTAC GCGGCCGCAA ACGGCATCTA CTGGTCGACA CCGGCGGCCT GCTGCTGCGC GCGGTGGTGC ACTCGGCCAG CGTGCAAGAC CGCGCCGGCG CCCGGCAGGT GCTGACCGGC ATCCATGCGT TGTTCCCGCT GCTGGCGCTG GTCTGGGTCG ACGGCGGTTA CGTCAACGTG GTCGATGCCG GGCTGGTCGG TTGGGCCCGG CGCGCCGAAG ACCTCGAAAT AGTGGCCGTG GCGCGCAACG CTGACCGCAG GGGCTTTCAG GTGCTGCCCC GCCGCTGGGT GGTGGAGCGG ACCTTCGGCT GGCTGACGAG GTGCAGACGG TTGGCACGCG ACTACGAACG CAAGACCAGT CACGCCGAGG CCATGATCAA GGTGGCGATG ATCCGGCTGA TGGCCGCCCG CCTGGCCGGT GAGGACCGCC AACCCCACGG CGCCATCGAG ACCGAAGCTG CCCGTCGCCT CGCCAAGGAT CTCGACAGAG ACCAGTAG
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Protein sequence | MCECLDREAY PSSLTDAQWA VVEPLLPVRD PRRGGRPLTY DRRLVLDTIL YVLVSGCAWR QVPHDLAPWD AAYRWFRAWS ADGTWDRVHD QLRDRLRARE GRTVQPSAAV LDSQSARSAE GGEAIGYDAG KRVRGRKRHL LVDTGGLLLR AVVHSASVQD RAGARQVLTG IHALFPLLAL VWVDGGYVNV VDAGLVGWAR RAEDLEIVAV ARNADRRGFQ VLPRRWVVER TFGWLTRCRR LARDYERKTS HAEAMIKVAM IRLMAARLAG EDRQPHGAIE TEAARRLAKD LDRDQ
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