| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2940 |
|---|
| Symbol | |
|---|
| ID | 8754612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 3067141 |
|---|
| End bp | 3068358 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, CdaR |
|---|
| Protein accession | YP_003409928 |
|---|
| Protein GI | 284991374 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.837438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGCG CCACGGTGAA CGGCAGCCAC GTGGACGAGG TGCTGTCCGA GGTGGCAGGG
GCGGCCAGCG CTCGACACGG TCTTCCTCCT GCACTACTGG ACGGTTATCC ACGGGCCTTG
ATGACGGTGG CCCGGACCGG CCGGATGCTC AGCGCCGAGG AGCAGGCGGC CTGTCGCCGA
CTGGGCGGTG AGGCGGTCGC GATGGGGGTC GGCCTACCGG CTCTTGTCGA CGTGCACATG
AACGCGTCGC GCCGGCTGTG GTCCCGCCTG CCCGAGCTCC TCCGCGCATC CCGGGGTCGG
CCGGTCCGGT CGGCGGAGCT CATGGGCATC GGGGAGGCCG TGTGGCGAGC CGCCGACGCC
GCGCTGGCCG CTCTGACCGC GGGCTACGTC GAGGCGCAAC GCCTCGTCGT CCGGCGCGAG
GAGGAGTTCC GGCTCGAGTT CGTCGACGAC CTGTTGGCCG GTCTGGCCCC GGTCGGCCTG
CTGATCGAGC GCGCCGAGTT CTTCGGGCTG CAGTTGAACG GTGCCCACGT GGTGGTGGTG
GCCGAGGGGC AGCGGCCCAT CGACTCGGGC AGTGGTGTCC GCGGAGTTGC AGAGGACGCC
CTGCGGGCCC GCTTCGGGGA CAGGGGGCTG CTCGCAGCGG CCAAGAACGG TCGGCTCGTC
TGCGTCCTCA GCTGTCCACG GGACGCGGAT GGCTGTGCCG ACCTCGGTCG GCAGGTCGCC
GGGATCGTCG GGCCCCTCGT GTCCCGGACC GCGCGCGGGG GGCCGTGGCG GGCCGGGGCC
GGACGGCCGC ACACCGGGCC GCGGGGCGTG CAACGGTCCT ACCAGGAGGC GGTGGAGGCC
CTCGAGACGG CCAGCCGCCT GAGCCTGCGG CAGCAGGTGG TCCAGGCTGC CGACCTGCTG
GTGTACCGCG TCCTCGCGCG CGACGAGACG GCCCTGTCCG ACCTCGTCCA CACGGTCCTC
GAGCCGCTGA CGGGTGCTCG CGGAGGAGCA GCGCCGCTGG TCGAGACGCT GGAGGCCTAC
TTCTCCGCCG GGCGGAACGC CGCCGAGACG GCCCGCCGGC TCCACCTGAG CGTCCGGGCC
GTCACCTACC GGTTGCAGCG CGTGCGGGAA CTCACCGGCT ACGACGCCGG GGAGCCCGAC
CACCACCTGC CCCTGCTCGT GGCCGTGACC GGCGCACGGT TGCTCGGCTG GCCCCAGCGC
CCGCTGGTCA GGGAGTGA
|
|---|
| Protein sequence | MRSATVNGSH VDEVLSEVAG AASARHGLPP ALLDGYPRAL MTVARTGRML SAEEQAACRR
LGGEAVAMGV GLPALVDVHM NASRRLWSRL PELLRASRGR PVRSAELMGI GEAVWRAADA
ALAALTAGYV EAQRLVVRRE EEFRLEFVDD LLAGLAPVGL LIERAEFFGL QLNGAHVVVV
AEGQRPIDSG SGVRGVAEDA LRARFGDRGL LAAAKNGRLV CVLSCPRDAD GCADLGRQVA
GIVGPLVSRT ARGGPWRAGA GRPHTGPRGV QRSYQEAVEA LETASRLSLR QQVVQAADLL
VYRVLARDET ALSDLVHTVL EPLTGARGGA APLVETLEAY FSAGRNAAET ARRLHLSVRA
VTYRLQRVRE LTGYDAGEPD HHLPLLVAVT GARLLGWPQR PLVRE
|
|---|
| |