| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2935 |
|---|
| Symbol | |
|---|
| ID | 8754607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 3063182 |
|---|
| End bp | 3065035 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase 15-related protein |
|---|
| Protein accession | YP_003409923 |
|---|
| Protein GI | 284991369 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGACTC GTCCGCTCTC CCGCGTCGAC GGATACCTGC CCATCGAGGA GCACGGGCTG
ATCGGGGACG GCGCCACCTG CGCCCTGGTC GCCCGCGACG GGTCGATCCC CTGGCTGTGC
CTGCCGGAGT TCGACAGCCC GCCGCTGCTG GCCGGGCTGC TCGACACCGA TCGCGGCGGC
GCCTTCACCA TGGCCCCGCG CGGACTGCGG GCCGGCGGCC AGCGCTACCT CGACGAGAGC
AACGTGCTGA TCACCGAGCT GACCGGTCCG GACGGCGTCG TGGAGCTCAC CGACTGCATG
GCACTGCGCT CCGGCGCCGA TCTGGGGGAG CTGGTGCCGG CCGGACGCAG CGAGCTGCTG
CGGGTCGCGC GGGTGGTCTC CGGCGCGGCC GAGCTCGACG TGCGGCTGGC TGTCCGCGAC
GACGTCCGCG TCACCCGCGA GAGCGGCGCC TGGCGGATCC ACTGGCCGGC GCGCCCCGAC
CTCGTCCTGG TGCTGTGGTG CTCGCACGAC CTCGAGGTCG CTCCCGACGG GTCGATCGGG
GGAGCGGTGC GGCTTCGTGC CGGGGAGCGG CTGACCGCCT CCCTGCACTG GTCGGGCAGC
ACCCGGCTGC TCGACCGCGC CGACCCGGCC CGACTGGTGC ACCAGACCGC CCAGGCCTGG
CGGTCGTGGG CCGGGAACCT GCAGTACGAG GGTCCCCAGC GCGGTCTGGT GCTGCGCTCG
GCCCTGGCGC TCAAGATGCT CGACCACGTG CCCAGCGGGG CGATCACGGC CGCGGCGACG
TCGTCCCTGC CGGAGGAGAT CGGCGGCGTG CGCAACTGGG ACTACCGCTT CACGTGGGTG
CGTGACGCCG CGTTCTCCAC CTACGCGCTG CGCCAGGTCG GGATGCCCAG CGAGTCGGAG
GCGTTCCTGG CCTGGACGCT CACGAACGTC GAGCGGGACG GGCAACCGCA CCTGATGTAC
GCCCTGGACG GTGGCCAGCC GCCGCCCGAG CAGGAGGACG CGGCCCTCTC GGGCTACCGC
GGCTCGGCGC CGGTGCGCTG GGGCAACGGC GCGGCGGGGC AGACCCAGCA CGACGTCTAC
GGCGAGCTGC TCGACGTCGC CTGGGGGTGG GTGAGGTCCG GGGGCCGGGT CGACGACCAC
CTGTGGGCGG CGTTGTGCGA CCTCACCGAG GCCGCCATCG CGAACTGGAG GACTCCCGAC
CACGGCATCT GGGAGGTCCG GAGCGCGGGG CGGCCGTTCA CCTACTCGGT GGCGCTGTGC
GCGGTCGCCG TCGAGCGGGC GCTGCGGATC GCCGAGGCGC GCGGTCTGGA CCACCCGCGC
GACCGGTGGC GCGCCGAGCT CGACCGGATC CGGTCAGCGG TGCTGGACCG GGCCTGGGAC
CCCGACCGCG GGTCGTTCAC CGAGCAGCTC GCCGACGATG ACGGCGGCCA GCGCGGCGGC
CTGGACGCCT CGCTGCTCAC CCTGCCGCTG CGCGGTCTGC TGCCCTTCGA CGACCCGCGG
ATGGTGGCCA CGACCGAGGC GGTGCGCCGG CACCTGGATG CCGGCGACGG CCTGCTCTAC
CGCTACCTGC ACGAGGAGTC CGACGACGGG CTGCCCGGCG GGGAGGGCGC GTTCCTGCTT
TGCAGCTTCT GGCTGGCCGA CAACCTGACC GGGCAGGGGC GGCTGGACGA GGCGCACACG
CTGTTCGAAT CGCTGTGCGG CCGGGCCAAC CACCTGGGCC TGCTGTCGGA GGAGATCGAC
CCGGGCACCG GCGCCTTCCT CGGCAACTTC CCGCAGGCCT TCAGCCACCT GGGGCTGATC
GCCAGCGGCG CCAATCTCGC GCGAGCCGAG GCGGCCGGGC GGAGCGCGCG GTGA
|
|---|
| Protein sequence | MLTRPLSRVD GYLPIEEHGL IGDGATCALV ARDGSIPWLC LPEFDSPPLL AGLLDTDRGG
AFTMAPRGLR AGGQRYLDES NVLITELTGP DGVVELTDCM ALRSGADLGE LVPAGRSELL
RVARVVSGAA ELDVRLAVRD DVRVTRESGA WRIHWPARPD LVLVLWCSHD LEVAPDGSIG
GAVRLRAGER LTASLHWSGS TRLLDRADPA RLVHQTAQAW RSWAGNLQYE GPQRGLVLRS
ALALKMLDHV PSGAITAAAT SSLPEEIGGV RNWDYRFTWV RDAAFSTYAL RQVGMPSESE
AFLAWTLTNV ERDGQPHLMY ALDGGQPPPE QEDAALSGYR GSAPVRWGNG AAGQTQHDVY
GELLDVAWGW VRSGGRVDDH LWAALCDLTE AAIANWRTPD HGIWEVRSAG RPFTYSVALC
AVAVERALRI AEARGLDHPR DRWRAELDRI RSAVLDRAWD PDRGSFTEQL ADDDGGQRGG
LDASLLTLPL RGLLPFDDPR MVATTEAVRR HLDAGDGLLY RYLHEESDDG LPGGEGAFLL
CSFWLADNLT GQGRLDEAHT LFESLCGRAN HLGLLSEEID PGTGAFLGNF PQAFSHLGLI
ASGANLARAE AAGRSAR
|
|---|
| |