Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_2820 |
Symbol | |
ID | 8754492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 2934981 |
End bp | 2937245 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | helicase, RecD/TraA family |
Protein accession | YP_003409821 |
Protein GI | 284991267 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00387787 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGGAGG CGCGGGCCGG GACGGTCCTG GAGGCGACGC TGGAGCGGAT CACGTACGCC AACTCCCAGA CCGGCTACAC GGTGGCCCGG GTGGACACCG GGCGGGGCGG CGACCTGGTC ACCGTCGTGG GGTCGCTGCT GGGTGCGCAG CCCGGGGAGA CGCTGCGGCT GCGCGGACGG TGGGGAGCGC ACCCGCAGTA CGGCCGGCAG TTCCTCGTCG AGGACCACAC CACCGTGCTG CCGGCCACGG TGCAGGGCAT CCGGCGCTAC CTGGGCTCGG GGCTGGTCAA GGGGATCGGG CCCCGGCTGG CCGAGCGGAT CGTGGACCAC TTCGGCACCG ACGCGCTGCG GGTGATCGAG GAGGAGCCGG GGCGGCTGGC CGAGGTGCCG AACCTGGGCC CCAAGCGGAC GCGGCTGATC ACCGCGGCCT GGGAGGAGCA GCGGGCCATC AAGGAGGTGA TGGTCTTCCT GCAGGGGGTG GGCGTCTCCA CCTCGCTGGC CGTGCGGATC TACCGCCAGT ACGGCGACGC CTCGATTGGC GTGGTCCGCA ACGAGCCCTA CCGGCTGGCC GCCGAGGTGT GGGGCATCGG GTTCCGGACC GCGGACACGA TCGCCGCCGC GGTGGGGATC CCGCACGACA GTCCGCACCG GGTCGAGGCG GGGGTGCAGT TCGTGCTCTC CGAGGCGACG GGGCAGGGTC ACTGCTTCCT CCCGGAGACC GAACTGGTCG CCCAGGCGGT CGAGGTGCTG CAGGTCCCGG CGGGCCTGGT GGGTCACTGC CTGGCCCTGC TCGTCGCCGA CCAGGGCGTG ATCCGCGAGG AGCTGCCCGG TCGGGGCGGG GAGCCGGCGA CGGCGGTGTA CTACCTCGTC CCCTTCCACC GGGCGGAGAT ATCCCTGGCC GCCGGGTTGC GGAGGCTGGT GGACGCCGAC GTCGACCGGA TGCCGGCGTT CGCGAGCGTG GACTGGACCG CGGCACTGAG CTGGCTGGGC AGGCGCACCG GCGTCGAGCT CGCCGCCGGA CAGCAGGCGG CGGTGCGCCT GGCACTGACC GAGAGGGTCG CCGTCCTCAC CGGCGGTCCC GGCTGCGGCA AGAGCTTCAC GGTGCGCTCC ATCGTCACGC TGGCCGCGGC CAAGGGGGCG AGGATCGTGC TGGCCGCACC GACCGGCCGG GCGGCGAAGC GGCTGACCGA GCTGACCGGG GTCGAGGCGG TGACCGTGCA CCGGCTGCTC GAGCTGCGGC CGGGCGGGGA CGCCGCCTTC GACCGGGACC GGCCGCTGGA GGCCGACCTG GTCGTCGTCG ACGAGTCCTC GATGCTGGAC CTGCTGCTGG CGAACAAGCT GGTGCGGGCC GTCCCGCCGG GCGCGCACCT GCTGCTCGTG GGCGACGTCG ACCAGCTGCC CTCGGTGGGC GCCGGCGAGG TCCTGCGCGA CCTGCTCGCC GAGGGCACCC CGATCCCGCA CGTGCGGCTG ACCGAGGTCT TCCGGCAGGC CAGCCGGTCG GGGGTGGTCA CCAACGCGCA CCGCGTCAAC GCCGGCAGCT TTCCGCAGGT CCGCGGCCTC GACGACTTCT TCCTGTTCAG CACCGACGAC GCCGAGGAGG CCGCCCGGCT CACCGTCGAC GTGGTGGTGC GCCGCATCCC GGCCCGCTTC GGCCTCGACC CCCGCCGGGA CGTGCAGGTG CTGACCCCGG TGCACCGCGG GCCGGCCGGC GCCGCCGTGC TGAACGAGCT GCTGCAGGAG GCGCTCACCC CGGCCCGCCC CGACCGGGCG GAGAAGCGCT TCGGTGGGCG GGTGTTCCGC GTCGGGGACA AGGTCAGCCA GATCCGCAAC GACTACGACA AGGGCGCCAA CGGGGTCTTC AACGGCACCC AGGGCGTCGT CACCGCGATC GACCCGGTCG AGCAGACCCT CACCGTCGTC ACCGACGAGG GGGAGCAGAT CCCCTACGAC TTCGGTGAGC TCGACGAGCT GGTCCACGCC TACGCCGTCA CCGTCCACCG CTCCCAGGGC AGCGAGTACC CCTGCGTCGT CATCCCGGTG ACCACCAGCG CCTGGATGAT GCTGCAGCGC AACCTGCTCT ACACCGCCGT CACCCGTGCC AAGCAGCTCG TGGTGCTCGT CGGCTCCACC CGGGCCCTCG GCCAGGCGGT CCGCGTCACC GGCTCCGGAC GCCGGCACAC CGCCCTCGCC CACCGCCTCC GGGGCGGACC GCACCGCAGC GCGGCTGCAC CGACACCGCT CGCCGTCGGG GCCGGACGGG GCTGA
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Protein sequence | MGEARAGTVL EATLERITYA NSQTGYTVAR VDTGRGGDLV TVVGSLLGAQ PGETLRLRGR WGAHPQYGRQ FLVEDHTTVL PATVQGIRRY LGSGLVKGIG PRLAERIVDH FGTDALRVIE EEPGRLAEVP NLGPKRTRLI TAAWEEQRAI KEVMVFLQGV GVSTSLAVRI YRQYGDASIG VVRNEPYRLA AEVWGIGFRT ADTIAAAVGI PHDSPHRVEA GVQFVLSEAT GQGHCFLPET ELVAQAVEVL QVPAGLVGHC LALLVADQGV IREELPGRGG EPATAVYYLV PFHRAEISLA AGLRRLVDAD VDRMPAFASV DWTAALSWLG RRTGVELAAG QQAAVRLALT ERVAVLTGGP GCGKSFTVRS IVTLAAAKGA RIVLAAPTGR AAKRLTELTG VEAVTVHRLL ELRPGGDAAF DRDRPLEADL VVVDESSMLD LLLANKLVRA VPPGAHLLLV GDVDQLPSVG AGEVLRDLLA EGTPIPHVRL TEVFRQASRS GVVTNAHRVN AGSFPQVRGL DDFFLFSTDD AEEAARLTVD VVVRRIPARF GLDPRRDVQV LTPVHRGPAG AAVLNELLQE ALTPARPDRA EKRFGGRVFR VGDKVSQIRN DYDKGANGVF NGTQGVVTAI DPVEQTLTVV TDEGEQIPYD FGELDELVHA YAVTVHRSQG SEYPCVVIPV TTSAWMMLQR NLLYTAVTRA KQLVVLVGST RALGQAVRVT GSGRRHTALA HRLRGGPHRS AAAPTPLAVG AGRG
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