| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2794 |
|---|
| Symbol | |
|---|
| ID | 8754466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 2911889 |
|---|
| End bp | 2912782 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003409795 |
|---|
| Protein GI | 284991241 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.68138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCGA TCACCGATGT CGCACCGGTC GCCGCCACCC GCACGCCCCA GGGTCAACCC
CGCCGGCCGC GCAAGCCGCG GTCCGGTGCC CTCCTGGGGC TGCTCGCCTG GCTGATCGGC
TTCCTGTTCG TCGTGCCGGT GCTCTGGATG GTGCTCACGT CGTTCCACAG CGAGGAGGAC
GCCGCCACCA ACCCGCCGTC GCTCTTCGCC CCGCTGACCA CCGAGGGCTA CCAGTCCTTC
TTCGGTGTGG GCGCCGGCAC CAGCCCCTGG CCGTCGCTGG CCAACTCGCT GACCGCCAGC
GTGGTCTCCA CGATCATCGT GCTGCTGCTG GCCATCCCGG CCGCCTACGC GCTGTCGATC
AAGCCGGTGC GCAAGTGGAC CGACGTGATG TTCTTCTTCC TGTCCACCCG GATGCTGCCG
ATCGTGGCCG GGCTGCTGCC CATCTACCTG TTCGCCCAGT TCACCGGGCT CCTGGACAAC
ATCTGGCTGC TCATCGTGCT GTACACGGCC ATGAACCTGC CGATCGCGGT CTGGATGATG
CGCTCGTTCC TCGCCGAGGT CCCGGTCGAG ATCCTCGAGG CGGCCTCGAT GGACGGCGCG
GGGCTGCTGC TGACCCTCCG TCAGGTGGTG GCGCCCATCG TCCTGCCGGG CATCGCCGCG
ACCTCGCTGA TCTGCTTCAT CTTCAGCTGG AACGAGCTGC TGCTGGCCCG GACCCTGACC
GGCACCGTGG CCGGGACCGC GCCGGTCTAC CTGACCGGTT TCGTGACCAG CCAGGGGCTC
TTCCTCGCGC AGGTCTGCGC GGCCTCGTTC GTGGTGTCGC TGCCGGTGCT CGTCGCCGGC
TTCGCCGCCC AGGACAAGCT GGTGCAGGGG CTGTCGCTGG GCGCGGTCAA GTGA
|
|---|
| Protein sequence | MSSITDVAPV AATRTPQGQP RRPRKPRSGA LLGLLAWLIG FLFVVPVLWM VLTSFHSEED
AATNPPSLFA PLTTEGYQSF FGVGAGTSPW PSLANSLTAS VVSTIIVLLL AIPAAYALSI
KPVRKWTDVM FFFLSTRMLP IVAGLLPIYL FAQFTGLLDN IWLLIVLYTA MNLPIAVWMM
RSFLAEVPVE ILEAASMDGA GLLLTLRQVV APIVLPGIAA TSLICFIFSW NELLLARTLT
GTVAGTAPVY LTGFVTSQGL FLAQVCAASF VVSLPVLVAG FAAQDKLVQG LSLGAVK
|
|---|
| |