| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2679 |
|---|
| Symbol | |
|---|
| ID | 8754351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 2788314 |
|---|
| End bp | 2789819 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF245 domain protein |
|---|
| Protein accession | YP_003409685 |
|---|
| Protein GI | 284991131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.242162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGC GGCGGGTCAT GGGCACCGAG ATCGAGTACG GCATCTCGGT GCCCGGGCAG
CCGACGGCGA ACCCGACGAC GCTGTCCAGC CAGGTCGTGA ACGCCTGGGC GGTGGCCGAG
GCGCCCACGC CACGCCGGCC GCGCTGGGAC TTCGAGGAGG AGTCGCCGCT GCGTGACGCC
CGCGGCTTCG ACCTGTCCCC GGCCCAGGCG CTGGACCACA ACGACCTGGA GGAGGACTCG
GGGATGGCCA ACGTCATCCT CACCAACGGA GCCCGCCTCT ACGTCGACCA CGCGCACCCG
GAGTACTCGA CGCCGGAGGT CACCAACCCG CGCGACGTCG TCCTGTGGGA CAAGGCGGGG
GAGCAGGTGA TGGCCGAGGC GGCCCGGCGG GCCGCGCGCG TCCCGGGCAC CCAGCCGATC
CAGCTGTACA AGAACAACAC CGACGGCAAG GGCGCCTCCT ACGGCGCGCA CGAGAACTAC
CTGATGGACC GGCGGACGCC GTTCCTCGAC ATCATCCGGG GGCTCATCCC GTTCTTCGTG
ACCCGCCAGG TGGTGGCCGG CTCGGGGCGC GTGGGCATCG GCACCGAGAG CCGCACGCAG
GGCTTCCAGC TCTCCCAGCG CGCGGACTTC TTCGAGGTCG AGGTGGGGCT GGAGACGACG
CTCAAGCGGC CGATCATCAA CACCCGCGAC GAGCCGCACG CCGACGCCGA CAAGTACCGC
CGGCTGCACG TGATCATCGG CGACGCCAAC CTCGCCGAGC TGTCCACCTA CCTGAAGGTG
GGGACGACGG CGCTGGTGCT GGACATGATC GAGGCGCGCA CCCTGACCCG GGACCTCTCG
CTGGAGGAGC CGGTCGCGGA GCTGCAGGCG ATCAGCCACG ACCCGTCGCT GACCCACCGG
GTGCGGCTGC GCGACGGGCG CCGGATGACG GCGCTGGAGG TGCAGCAGTC CTACCTGGAG
ATGGCGCAGC GGCACGTCGA CCGGCACGGG GAGGACGACG GGCAGTCCAC CGACGTGCTG
CGCCGGTGGG CCGAGGTGCT CGAGGACCTC GCCGTCGACC CGATGCGCTG CGCCGACCGG
CTGGACTGGC CGGCGAAGCT GCGGCTGCTG GAGGGCTACC GCTCCCGCGA CGGCCTCGCG
TGGGGCGACT CCCGGCTGCA CCTGGTGGAC CTGCAGTACT CCGACGTGCG GCCGGAGAAG
GGGCTGTACC ACCGGCTGGT GTCGCGCGGG TCGATGCAGC GGATGCTGGC CGACGACGAG
GTGACGCACG CGATGGTGCA CCCGCCGTCG GACACCCGGG CCTTCTTCCG CGGGGAGTGC
CTGCGCCGCT ACCCGGCCCA GGTGGCCGCG GCGTCGTGGG ACTCGGTGGT CTTCGACCTC
GGGCGGGAGA ACCTGGTCCG CATCCCGACC ATGGAGCCGC TGCGGGGCAC CCGCGACCAC
GTCGGCGCGC TGTTCGAGTC GACGTCCTCG GCGCAGGAGC TGGTCGACAC CATCACCGGC
GGCTGA
|
|---|
| Protein sequence | MSVRRVMGTE IEYGISVPGQ PTANPTTLSS QVVNAWAVAE APTPRRPRWD FEEESPLRDA
RGFDLSPAQA LDHNDLEEDS GMANVILTNG ARLYVDHAHP EYSTPEVTNP RDVVLWDKAG
EQVMAEAARR AARVPGTQPI QLYKNNTDGK GASYGAHENY LMDRRTPFLD IIRGLIPFFV
TRQVVAGSGR VGIGTESRTQ GFQLSQRADF FEVEVGLETT LKRPIINTRD EPHADADKYR
RLHVIIGDAN LAELSTYLKV GTTALVLDMI EARTLTRDLS LEEPVAELQA ISHDPSLTHR
VRLRDGRRMT ALEVQQSYLE MAQRHVDRHG EDDGQSTDVL RRWAEVLEDL AVDPMRCADR
LDWPAKLRLL EGYRSRDGLA WGDSRLHLVD LQYSDVRPEK GLYHRLVSRG SMQRMLADDE
VTHAMVHPPS DTRAFFRGEC LRRYPAQVAA ASWDSVVFDL GRENLVRIPT MEPLRGTRDH
VGALFESTSS AQELVDTITG G
|
|---|
| |