Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_2378 |
Symbol | |
ID | 8754049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 2467487 |
End bp | 2469190 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003409423 |
Protein GI | 284990869 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.900828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGTCA CCGAGGCCTA CCGGGCGAGC CGGGACCAGC TGCTCGGGCT GCGCGGCCGG CACGAGCAGG CGGTCGCCGA GTTCCGCTGG CCCGAGCTCG GGGATCGGTT CAACTGGGCG GTCGACTGGT TCGACGCCGT CGCCCGGGAC AGCGACCGCC CCGCCCTGGT CCTGGTCGAG GAGGACGGGA CGACGACGCG GCGCAGCTAC GCGGAGATGT CGCGCGCGTC GGACCGGCTG GCCGCGTGGC TCGCCGGCCG GGGCGTCGGG AAGGGCGACC CGGTGCTGCT CATGCTCGGC AACCAGGTCG AGCTGTGGGA GTCGATGCTC GCGGTGGCGA AGCTCGGGGC GGTGATCATG CCGACCACCA CCGCGGTCGG CCCGGCCGAC CTGGTCGACC GGATCACCCG CGGCGGTGCC CGGCACGTCG TCTGCAACGC GGCCGACGTC GCGACGTTCG ACGAGGTCCC CGGCGACTAC ACCCGGATCA GCGTCGGGCC GGCCGAGGGC TGGGCCGACC TGCACGCCGC CGCGGACCTC GAGCACGCCC CGGTGGAGCA CCCGGGGACC GCGCCCGGCG ACCCGCTGCT GCTGTACTTC ACCTCCGGGA CGACGTCCCG CCCGAAGCTG GTCGAGCACA CCCAGGTCTC CTACCCGGTC GGGCACCTGT CGACGGTGTA CTGGCTGGGC CTGCAGCCCG GCGACGTGCA CCTCAACATC TCCTCGCCGG GGTGGGCCAA GCACGCCTGG TCCTGCTTCT TCGCGCCGTG GATCGTCGAG GCCACCGCCC TCGTCTACAA CTACCGGCGC TTCGACCCCG CCGCGCTGCT GGCCCTCGTC CGCGAGCACG GCGTCACCTC CTTCTGCGCG CCGCCCACGG TGTGGCGGAT GCTGATCCAC GCCGACCTGT CCGGCGGTCC CGGCGCGCTG CGCGAGGTCA TCGGCGCCGG CGAGCCGCTC AACCCGGAGG TCATCGAGCA GGTGCGGCGT GCCTGGGGGC TGACCATCCG CGACGGGTAC GGCCAGACCG AGACCACCGC GCAGATCGGC AACACGCCGG GGTCGGAGGT CAAGCCCGGG TCCATGGGCC GTCCGCTGCC CGGCGTGCCG GTGGTGCTGG TCGACCCGAT CACCGGCCGC CCGGTCGAGG GGCCGGGGGA GGGGGAGATC TGCCTGGACC TCGCGCAGCA CCCGCTCCCG CTGATGACCG GCTACCAGGG CGATCCCGAG CGCGCCGCTG AGGCGATGGC CGGCGGGTAC TACCACACCG GGGACGTCGC GAGCGTCGAC GCCGACGGGT ACGTCACCTA CATCGGGCGC ACCGACGACG TCTTCAAGGC CAGCGACTAC AAGATCAGCC CGTTCGAGCT GGAGTCGGTG CTCATCGAGC ACCCGGCGGT CGCCGAGGCA GCCGTCGTCC CGGCGCCGGA CGCCCTGCGG CTGGCGGTGC CCAAGGCCTA CGTCACGCTG GCTCCGGGGC ACGAGCCGAC GGGGGAGACG GCGCTGTCGG TGCTGCGGTA CGCCCGCGAG CACCTCAACC CCTACCAGCG GGTGCGGCGG ATCGAGTTCG CCGAGCTGCC CAAGACCATC TCGGGGAAGA TCCGGCGGGT GGAGCTCCGC GCCCGCGAGG AGGAGCTCGC CACCGCCGAT CCGCGCTCCG GCGTGGAGTG GCGGGACGAC CAGTTCCCCG AGCTCAAGAG CTGA
|
Protein sequence | MDVTEAYRAS RDQLLGLRGR HEQAVAEFRW PELGDRFNWA VDWFDAVARD SDRPALVLVE EDGTTTRRSY AEMSRASDRL AAWLAGRGVG KGDPVLLMLG NQVELWESML AVAKLGAVIM PTTTAVGPAD LVDRITRGGA RHVVCNAADV ATFDEVPGDY TRISVGPAEG WADLHAAADL EHAPVEHPGT APGDPLLLYF TSGTTSRPKL VEHTQVSYPV GHLSTVYWLG LQPGDVHLNI SSPGWAKHAW SCFFAPWIVE ATALVYNYRR FDPAALLALV REHGVTSFCA PPTVWRMLIH ADLSGGPGAL REVIGAGEPL NPEVIEQVRR AWGLTIRDGY GQTETTAQIG NTPGSEVKPG SMGRPLPGVP VVLVDPITGR PVEGPGEGEI CLDLAQHPLP LMTGYQGDPE RAAEAMAGGY YHTGDVASVD ADGYVTYIGR TDDVFKASDY KISPFELESV LIEHPAVAEA AVVPAPDALR LAVPKAYVTL APGHEPTGET ALSVLRYARE HLNPYQRVRR IEFAELPKTI SGKIRRVELR AREEELATAD PRSGVEWRDD QFPELKS
|
| |