| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2359 |
|---|
| Symbol | |
|---|
| ID | 8754030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 2449159 |
|---|
| End bp | 2450475 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, PucR family |
|---|
| Protein accession | YP_003409406 |
|---|
| Protein GI | 284990852 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0658423 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGCAGA GTGCTGCGAG GGTCCGGTGG CCGGACACGT CCCCACGCGT GCGGGAGCTC
TTCCGGCGGG GCGCCGAGGT GGCGCTCGAC CCGCGCGCGG ACTGGGTGGA GGAGCTCCAC
GCCGCGGCCC TCGGCGGGCA GCGGATGCGG CCGGTCGCCG AGGACCCGGT GCTCGCCGCC
GCGACCCGGC GGGTCAACCT GGCCAACCTG CTGCACTGGG CGGCGGCCAA CGTGCAGCAC
CCGGGTCGCC GGGTGCCGCC CAACACCGGG CCGGAGTCGC TGGACACGGC GCGTGACCTG
GTGCGCCGGG GCCTGGACGA GTCGGTCCTG GACGCCTACC GAGCCGCCCA GGGCGTGGCC
TGGCGGCGGT GGATGCAGAT CTGCTTCGAG CTCACCGCCG ATCCCGCCGA GCTGCGCGAG
CTGCTCGACG TCTCCGCGCT GTCGATCGCC ACCTTCATCG AGGACACCGT CGCGGCCACC
TCGGAGCGGA TGCGGGCCGA GCGCGACGAG CTCACCCGAG GCGCGCACGC CGAGCGGCGG
GCCGCGGTCA CCCTGCTGCT GGAGGGCGCC CCGATCAGCC GGGCCCGGGC CGAGGCCCAG
CTCGGCTACG GCCTGGCCGG CCCGCACACC GCCGCCGTCG TGTGGAGCGG GTCGGGGACG
GCCTCCGAGC AGCTGGAGGC CGCCGCGGAG GCCGTCGTCC GGGCGAGCGG GGCCGCGCAC
CGGCTGACCG TCGTCGCCAG CGCCGCCGCG CTGTGGGTCT GGCTACCCGT GGCGACCGCG
CCGGACGCCG GGAAGCTCGC CGGCGAGCTG GCCGCGCACC CCGACGTCCG GGTGGCGGTC
GGCCGCCCCG GCCGGGACGT CGACGGCTTC CGCCGCAGCC ACCTCGACGC CGCCACCACC
CAGCGGATGG TCGCCCGGCT GCAGAAGGAC CCCGCTGCCC CCCACCACTC GCAGGCTCGC
GGCGGGACCC TGCAGCGGGG CCACCCCACG CGGCAGGTCC CCTGCCAGGT CGCCCGCTAC
GAGGACGTGC AGCTGGTCGC CCTGCTCACG GCCGAGCCGA CCCTGGCCGA CGAGTTCCTC
GCCGACACCC TCGGTGACCT GCTGCACGCC GAGGCCGAGA CCCGGCACGC GGTGCTGACC
TACGTGCGCG AGCTGGGCAG CACCTCGCGC ACCGCCGAGC GGCTGTACAC CCACCGCAAC
ACGGTGCTGC GCCGGCTGGC CCGTGCCGAC GAGCTGCTGC CACGTCCGCT CGCCCAGAAC
GTCGTCGCCG TCGCCGCGGC CCTGGAGGTG CTGCGCTGGC GCGGGACCGC GGGGTGA
|
|---|
| Protein sequence | MVQSAARVRW PDTSPRVREL FRRGAEVALD PRADWVEELH AAALGGQRMR PVAEDPVLAA
ATRRVNLANL LHWAAANVQH PGRRVPPNTG PESLDTARDL VRRGLDESVL DAYRAAQGVA
WRRWMQICFE LTADPAELRE LLDVSALSIA TFIEDTVAAT SERMRAERDE LTRGAHAERR
AAVTLLLEGA PISRARAEAQ LGYGLAGPHT AAVVWSGSGT ASEQLEAAAE AVVRASGAAH
RLTVVASAAA LWVWLPVATA PDAGKLAGEL AAHPDVRVAV GRPGRDVDGF RRSHLDAATT
QRMVARLQKD PAAPHHSQAR GGTLQRGHPT RQVPCQVARY EDVQLVALLT AEPTLADEFL
ADTLGDLLHA EAETRHAVLT YVRELGSTSR TAERLYTHRN TVLRRLARAD ELLPRPLAQN
VVAVAAALEV LRWRGTAG
|
|---|
| |