Gene Gobs_2187 details

Gene Information

• Locus tag: Gobs_2187
• ID: 8753858
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: +
• Start bp: 2270965
• End bp: 2271525
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 73%
• Product: protocatechuate 3,4-dioxygenase, alpha subunit
• Protein accession: YP_003409241
• Protein GI: 284990687

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.934275
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCAGC TGCAGACGAC GCCGAGCGCC ACCGTCGGCC CCTACCTGGC GATCGGGCTG 
ACCTGGGAGG GCGGCGAGCT CGTCGTCCCG CCGGACACGC CGGGCGCGAT CTGGCTGCGC 
GGCACGGTGT TCGACGGCAA CGGCGACCCG ATCCCCGACG CGATGGTCGA GACCTGGCAG 
GCCGACCCCG ACGGCCGCTT CGACCACCCC GACGACCCGC GCGGTGCCAC CCGGTACCCC 
GGATTCACCG GCTTCGGCCG CTCGCACACC GACTCGGGGG AGTACGCCAT CTGCACGCTC 
AAGCCCGGCC GGGTGCCCGA CGGCGAGGGC GGTCTGCAGG CGCCGCACGT CGACGTCTCG 
CTGTTCGCCC GCGGGCTCCT CGACCGGGTC GTCACGCGGA TCTACTTCGC CGACGAGGCC 
GAGGCCAACG CCCAGGACGT CGTCCTGCGG GGGCTGCCGG AGGACCGCCG GCAGACGCTG 
CTCGCCACGC CGACCGACGA CGGCTACCGC CTCGACCTGT ACCTGCAGGG CGATCGGGAG 
ACGGTGTTCT TCGCCGTATG A 

 

Protein sequence

MTQLQTTPSA TVGPYLAIGL TWEGGELVVP PDTPGAIWLR GTVFDGNGDP IPDAMVETWQ 
ADPDGRFDHP DDPRGATRYP GFTGFGRSHT DSGEYAICTL KPGRVPDGEG GLQAPHVDVS 
LFARGLLDRV VTRIYFADEA EANAQDVVLR GLPEDRRQTL LATPTDDGYR LDLYLQGDRE 
TVFFAV