Gene Gobs_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGobs_2020 
Symbol 
ID8753691 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameGeodermatophilus obscurus DSM 43160 
KingdomBacteria 
Replicon accessionNC_013757 
Strand
Start bp2093545 
End bp2094739 
Gene Length1195 bp 
Protein Length397 aa 
Translation table11 
GC content72% 
IMG OID 
ProductLigA 
Protein accessionYP_003409080 
Protein GI284990526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.389387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGCT CCATCACCCG CATCACGCTC AGCGACGGTT CCGCCCGCTA TCGCGCCCGG 
TATCGAGACC CTGGCGGTCG TCAGCACGAG CGGCGCTTCG TGCGGAAAGG TCGACGCCCA
GCGCTGGCTC GACGAGGCCA CCTCGGCCCT CGTCACGCAG ACATGGACGG CGCCGGCGCG
CGGCCGGGTC ACCGTCGCCG ACTGGGCCGA TCGGTGGCTG GCCTCGCAGA CCGGTGTGAA
GCCGAGCACG CTCTACCGCT ACGGCAACCT GCTGCGGACC CACGTGCTGC CGACCTGGGG
GAAGCACCAG CTCGCCGATG TCACGCACGC CGATGTCGCC GTCTGGGTCG CCAAGTTGCT
GGGCCAGGGG TCCGCCGCGG GCACCGTACG TCAGGCCCAC CGGGTGTTCT CGCTGTTGCT
CGGCCTCGCC GTCCGCGACG GGCGCATCCC GCGCAACCCG GCCGAGCGAG TGCCACTGCC
TCGCGTGATC CGGAGCGAGC CGAGGTTCCT CACCCACGAC GAGGTTGAGC GGCTCGCGGA
CGCAGCAGGC GCCGAGGGTG ACGTCATCCG GCTGCTGGCG TACACCGGAC TGCGCTTCGG
TGAGATGGCC GCCCTGCGCG TCCGTCGCGT CGACTTCCTC CGGCGCCGGC TCACCATCGC
CGAGGCCGTC ACCGAGGTCG GCGGGCGGCT CGAGTTCGGT ACGCCCAAGA CCCATCAGCA
GCGGACCGTG CCCCTGCCCG CAACCCTCGC CGAGCCGCTG GCCCGCCGCT GCGAGGGCAA
GCAGGGCGAC GACCTGTTGG TGACCACGGC CAGCGGCACG GTGCTTCGCC TCCGCAACTG
GCGTCGCGTC GTCTTCGATC CGGCGGTACG AGCGGCCGGC CTGAGCGACG TCACTCCGCA
CGACCTACGC CACACCGCCG CGTCGCTCGC CGTCTCAAGC GGCGCCACAG TCAAGGCCGT
CCAGCGCATG CTCGGCCACG CCTCGGCGGC CATGACCCTG GACGTCTACT CCGGCCTCGT
CGACGACGAC CTCGCCGCGC TGGCCGACCG GATGGACGCT GCCGCGCGGG CAGCCGCGGA
GGCGCGTGTG GGCGCCGTGT GGGCGCGACC GCCAGCCGAT ACTCCGCCGA ACGGTAAATG
CGCTGGTCAA GGCGGTGGGC CCCGTGGGGA ATCGAACCCA CAACCCGCGG ATTAA
 
Protein sequence
MAGSITRITL SDGSARYRAR YRDPGGRQHE RRFVRKVDAQ RWLDEATSAL VTQTWTAPAR 
GRVTVADWAD RWLASQTGVK PSTLYRYGNL LRTHVLPTWG KHQLADVTHA DVAVWVAKLL
GQGSAAGTVR QAHRVFSLLL GLAVRDGRIP RNPAERVPLP RVIRSEPRFL THDEVERLAD
AAGAEGDVIR LLAYTGLRFG EMAALRVRRV DFLRRRLTIA EAVTEVGGRL EFGTPKTHQQ
RTVPLPATLA EPLARRCEGK QGDDLLVTTA SGTVLRLRNW RRVVFDPAVR AAGLSDVTPH
DLRHTAASLA VSSGATVKAV QRMLGHASAA MTLDVYSGLV DDDLAALADR MDAAARAAAE
ARVGAVWARP PADTPPNGKC AGQGGGPRGE SNPQPAD