Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_2020 |
Symbol | |
ID | 8753691 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 2093545 |
End bp | 2094739 |
Gene Length | 1195 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | LigA |
Protein accession | YP_003409080 |
Protein GI | 284990526 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.389387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGCT CCATCACCCG CATCACGCTC AGCGACGGTT CCGCCCGCTA TCGCGCCCGG TATCGAGACC CTGGCGGTCG TCAGCACGAG CGGCGCTTCG TGCGGAAAGG TCGACGCCCA GCGCTGGCTC GACGAGGCCA CCTCGGCCCT CGTCACGCAG ACATGGACGG CGCCGGCGCG CGGCCGGGTC ACCGTCGCCG ACTGGGCCGA TCGGTGGCTG GCCTCGCAGA CCGGTGTGAA GCCGAGCACG CTCTACCGCT ACGGCAACCT GCTGCGGACC CACGTGCTGC CGACCTGGGG GAAGCACCAG CTCGCCGATG TCACGCACGC CGATGTCGCC GTCTGGGTCG CCAAGTTGCT GGGCCAGGGG TCCGCCGCGG GCACCGTACG TCAGGCCCAC CGGGTGTTCT CGCTGTTGCT CGGCCTCGCC GTCCGCGACG GGCGCATCCC GCGCAACCCG GCCGAGCGAG TGCCACTGCC TCGCGTGATC CGGAGCGAGC CGAGGTTCCT CACCCACGAC GAGGTTGAGC GGCTCGCGGA CGCAGCAGGC GCCGAGGGTG ACGTCATCCG GCTGCTGGCG TACACCGGAC TGCGCTTCGG TGAGATGGCC GCCCTGCGCG TCCGTCGCGT CGACTTCCTC CGGCGCCGGC TCACCATCGC CGAGGCCGTC ACCGAGGTCG GCGGGCGGCT CGAGTTCGGT ACGCCCAAGA CCCATCAGCA GCGGACCGTG CCCCTGCCCG CAACCCTCGC CGAGCCGCTG GCCCGCCGCT GCGAGGGCAA GCAGGGCGAC GACCTGTTGG TGACCACGGC CAGCGGCACG GTGCTTCGCC TCCGCAACTG GCGTCGCGTC GTCTTCGATC CGGCGGTACG AGCGGCCGGC CTGAGCGACG TCACTCCGCA CGACCTACGC CACACCGCCG CGTCGCTCGC CGTCTCAAGC GGCGCCACAG TCAAGGCCGT CCAGCGCATG CTCGGCCACG CCTCGGCGGC CATGACCCTG GACGTCTACT CCGGCCTCGT CGACGACGAC CTCGCCGCGC TGGCCGACCG GATGGACGCT GCCGCGCGGG CAGCCGCGGA GGCGCGTGTG GGCGCCGTGT GGGCGCGACC GCCAGCCGAT ACTCCGCCGA ACGGTAAATG CGCTGGTCAA GGCGGTGGGC CCCGTGGGGA ATCGAACCCA CAACCCGCGG ATTAA
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Protein sequence | MAGSITRITL SDGSARYRAR YRDPGGRQHE RRFVRKVDAQ RWLDEATSAL VTQTWTAPAR GRVTVADWAD RWLASQTGVK PSTLYRYGNL LRTHVLPTWG KHQLADVTHA DVAVWVAKLL GQGSAAGTVR QAHRVFSLLL GLAVRDGRIP RNPAERVPLP RVIRSEPRFL THDEVERLAD AAGAEGDVIR LLAYTGLRFG EMAALRVRRV DFLRRRLTIA EAVTEVGGRL EFGTPKTHQQ RTVPLPATLA EPLARRCEGK QGDDLLVTTA SGTVLRLRNW RRVVFDPAVR AAGLSDVTPH DLRHTAASLA VSSGATVKAV QRMLGHASAA MTLDVYSGLV DDDLAALADR MDAAARAAAE ARVGAVWARP PADTPPNGKC AGQGGGPRGE SNPQPAD
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