Gene Gobs_1958 details

Gene Information

• Locus tag: Gobs_1958
• ID: 8753629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: -
• Start bp: 2032131
• End bp: 2034245
• Gene Length: 2115 bp
• Protein Length: 704 aa
• Translation table: 11
• GC content: 68%
• Product: glycogen debranching enzyme GlgX
• Protein accession: YP_003409025
• Protein GI: 284990471

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.182778
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCAGG TGTGGCCTGG AACCGCCTAC CCCCTCGGCG CGACCTACGA CGGCACCGGC 
ACCAACTTCG CCATCTTCAG CGAGGTGGCC GAGAAGGTCG AGCTGTGCCT GTTCGACGAC 
GACGGGACCG AGACCCGCAT CCGGCTCCCC GAGATGGACG GCTACGTCTG GCACGCCTTC 
CTCCCCGGGA TCCAGCCCGG CCAGCGCTAC GGCTACCGGG TGCACGGCCC CTACGACCCG 
TCGCAGGGCC TGCGCTGCAA CCCCAACAAG CTGCTGCTGG ACCCGTACGC GAAGGCGATC 
GACGGCCAGA TCGACTGGGA CCCGTCGGTC TTCGGCTACG ACTTCGACAG CGGTGAGCGC 
AACGACGAGG ACTCGGCCGC GCACATGCCG AAGTCCGTCG TCGTCAACCC GTACTTCGAC 
TGGGGCGTCG ACCGCCCGCC GAAGACGCCG TACCACAAGA CCGTCATCTA CGAGGCCCAC 
GTCAAGGGCC TGACGATGAC CCACCCCGAC GTACCGGAGG AGCTGCGCGG CACCTACGCC 
GGCATCGCCC ACCCGGCGGT CATCAGCTAC CTGCGGGACC TCGGGGTCAC CGCCGTCGAG 
CTCATGCCCG TGCACCAGTT CGTGCAGGAC GACACCCTCC AGCAGAAGGG CCTGCGGAAC 
TACTGGGGCT ACAACACCAT CGGGTTCTTC GCGCCGCACA ACGAGTACGC GAGCAACACC 
GACAACGGCA TGCACGTGCA GGAGTTCAAG GGGATGGTCC GCACCCTGCA CGAGGCGGGC 
ATGGAGGTCA TCCTCGACGT GGTCTACAAC CACACCGCCG AGGGCAACCA CCTGGGCCCC 
ACGCTGTCGT TCAAGGGCAT CGACAACCGG GCCTACTACC GCCTGGTCGA GGACGACCCG 
CAGTACTACA TGGACTACAC GGGCACCGGG AACTCGCTCA ACGCCCGCAC CCCGCAGGCG 
CTGCAGCTGA TCATGGACTC GCTGCGGTAC TGGATCACCG AGATGCACGT CGACGGCTTC 
CGCTTCGACC TGGCCTCCAC GCTGGCCCGC GAGCTGCACG CCGTCGACCG GCTGTCGGCC 
TTCTTCGACC TGGTGCACCA GGACCCGGTG GTCAGCCAGG TGAAGCTCAT CGCCGAGCCG 
TGGGACGTCG GCGAGGGCGG CTACCAGGTC GGCAACTTCC CGGCCCTGTG GACCGAGTGG 
AACGGCAAGT ACCGGGACAC CGTGCGTGAC TTCTGGCGCG GCGAGCCCTC GACGATCGGC 
GAGTTCGCCA GCCGCCTCAC GGGTTCGGCC GACCTGTACC AGCACTCCGG CCGACGTCCG 
GTGGCGAGCA TCAACTTCGT CACCGCGCAC GACGGGTTCA CGCTCAACGA CCTGGTCTCC 
TACAACGAGA AGCACAACGA GGCCAACGGC GAGGGCAACA ACGACGGCGA GAGCCACAAC 
CGCAGCTGGA ACTGCGGGGT GGAGGGCCCG ACCGTCGACA AGAAGGTCCT CACCCTGCGC 
GCCCGGCAGC GGCGCAACTT CCTGGCCACG CTGATGCTCA GCCAGGGGGT GCCGATGCTG 
CTGCACGGCG ACGAGCTGGG CCGCACGCAG CAGGGCAACA ACAACGGCTA CTGCCAGGAC 
TCGCCGCTGA CCTGGATCCA CTGGGACGAG GTGGACGAGG GGCTGCTGGA GTTCACCAAG 
CTGGTGACCC GGCTGCGGCA CGAGCACCCG ACGTTCCGCC GCCGCCGGTT CTTCCACGGC 
CGCCCGGTGC GCCGGGGCCA GGACGACCCG GTGCAGGACG TCGCCTGGCT GACCCCGGCC 
GGTGACCTGA TGACCGAGGA CGACTGGGAC GCCGGCTTCG CCAAGTCGCT GGCCATGTAC 
CTCAACGGCC ACGGCATCCG ATCCACCGAC GAGCGCGGCG AGGACGTCGT CGACGACCAC 
TTCTACCTGG CGTTCAACGC CTCGCACGAG CCGATGGACT TCTGCCTGCC GTCGGAGGAG 
TACGCCGGGG CGTGGACCGT CGTCCTCGAC ACCGCCGAGA TGGACGCGGT GGAGCCGCGG 
GAGCTCAAGC CCGGCGAGAC GCTGACGCTC CAGGACCGTT CGATGGTCGT GCTCAGCGCG 
CCGCGTCGTT CGTGA 

 

Protein sequence

MTQVWPGTAY PLGATYDGTG TNFAIFSEVA EKVELCLFDD DGTETRIRLP EMDGYVWHAF 
LPGIQPGQRY GYRVHGPYDP SQGLRCNPNK LLLDPYAKAI DGQIDWDPSV FGYDFDSGER 
NDEDSAAHMP KSVVVNPYFD WGVDRPPKTP YHKTVIYEAH VKGLTMTHPD VPEELRGTYA 
GIAHPAVISY LRDLGVTAVE LMPVHQFVQD DTLQQKGLRN YWGYNTIGFF APHNEYASNT 
DNGMHVQEFK GMVRTLHEAG MEVILDVVYN HTAEGNHLGP TLSFKGIDNR AYYRLVEDDP 
QYYMDYTGTG NSLNARTPQA LQLIMDSLRY WITEMHVDGF RFDLASTLAR ELHAVDRLSA 
FFDLVHQDPV VSQVKLIAEP WDVGEGGYQV GNFPALWTEW NGKYRDTVRD FWRGEPSTIG 
EFASRLTGSA DLYQHSGRRP VASINFVTAH DGFTLNDLVS YNEKHNEANG EGNNDGESHN 
RSWNCGVEGP TVDKKVLTLR ARQRRNFLAT LMLSQGVPML LHGDELGRTQ QGNNNGYCQD 
SPLTWIHWDE VDEGLLEFTK LVTRLRHEHP TFRRRRFFHG RPVRRGQDDP VQDVAWLTPA 
GDLMTEDDWD AGFAKSLAMY LNGHGIRSTD ERGEDVVDDH FYLAFNASHE PMDFCLPSEE 
YAGAWTVVLD TAEMDAVEPR ELKPGETLTL QDRSMVVLSA PRRS