| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1926 |
|---|
| Symbol | |
|---|
| ID | 8753597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 1997674 |
|---|
| End bp | 1998879 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | 4-hydroxyphenylpyruvate dioxygenase |
|---|
| Protein accession | YP_003409000 |
|---|
| Protein GI | 284990446 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.127663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTCG AGCAGGCACT GAACGATGAC GAGCGCCTGG CGCAGCTGGA CCTCGATCAG
CTGAAGCAGC TCGTCGGGCT GGTGGAGTAC GACGCCTCCG GCGACCCCTT CCCGGTGTCG
GGGTGGGACG CGCTGGTGTG GGTCGTGGGA AACGCCACCC AGGCGGCGCA CTTCCACCAG
TCGGCCTTCG GCATGGAGCT GGTCGCCTAC TCCGGCCCGG AGACGGGCAA CCGCGACCAC
CTGGCCTACG TCCTGGAGTC AGGCGCGGCC CGATTCGTGG TCAGGGGGGC CTACGACCCG
GCCAGCCCGC TGGCCGACCA CCACCGCAAG CACGGCGACG GCATCGTCGA CATCGCCCTG
TCGGTCCCGG ACGTCGACCG GTGCATCGCG CACGCCGCCG CCCAGGGGGC CACCGTCCTC
GAGCAGCCGC ACGACATCAG CGACGAGTTC GGCACCGTCC GGATCGGCGC GATCGCCACC
TACGGGGACA CGCGGCACAC CCTGGTCGAC CGCTCCCGCT ACACCGGCCC GTACCTGCCC
GGCTACGTCG AGCGCCGCTC CTCCCACGTG AAGCGGGACG GCGCCCCCAA GCGGCTGTTC
CAGGCCGTCG ACCACGTCGT CGGCAACGTG GAGCTCGGCG CCATGGACCG GTGGGTCGAG
TTCTACAACC GCGTCATGGG CTTCACCAAC ATGGCGGAGT TCGTCGGCGA GGACATCGCC
ACGGACTACT CGGCGCTGAT GAGCAAGGTG GTGGCCAACG GCAACCACCG GGTCAAGTTC
CCGCTCAACG AGCCGGCGAT CGGCAAGAAG AAGTCGCAGA TCGACGAGTA CCTGGAGTTC
TACGGCGGTC CCGGCGCCCA GCACGTCGCC CTGGCCACGA ACGACATCCT GACCACGGTC
GACGCGCTGC GCGCCGAGGG CATCGAGTTC CTCGCCACTC CGGACTCCTA CTACGAGGAC
CCGGAACTGC GGGCCCGCAT CGGCGAGGTC CGCGCGCCCA TCGAGGAGCT GCAGGAGCGC
GGGGTCCTGG TCGACCGCGA TGAGGACGGC TACCTGCTGC AGATCTTCAC CAAGCCGCTC
GGCGACCGGC CGACCGTCTT CTTCGAGCTG ATCGAGCGGC ACGGCTCGCT GGGCTTCGGC
ATCGGTAACT TCAAGGCGCT GTTCGAGGCG ATCGAGCGGG AGCAGCACAA GCGCGGCAAC
TTCTGA
|
|---|
| Protein sequence | MSLEQALNDD ERLAQLDLDQ LKQLVGLVEY DASGDPFPVS GWDALVWVVG NATQAAHFHQ
SAFGMELVAY SGPETGNRDH LAYVLESGAA RFVVRGAYDP ASPLADHHRK HGDGIVDIAL
SVPDVDRCIA HAAAQGATVL EQPHDISDEF GTVRIGAIAT YGDTRHTLVD RSRYTGPYLP
GYVERRSSHV KRDGAPKRLF QAVDHVVGNV ELGAMDRWVE FYNRVMGFTN MAEFVGEDIA
TDYSALMSKV VANGNHRVKF PLNEPAIGKK KSQIDEYLEF YGGPGAQHVA LATNDILTTV
DALRAEGIEF LATPDSYYED PELRARIGEV RAPIEELQER GVLVDRDEDG YLLQIFTKPL
GDRPTVFFEL IERHGSLGFG IGNFKALFEA IEREQHKRGN F
|
|---|
| |