Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1918 |
Symbol | |
ID | 8753589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 1988194 |
End bp | 1989399 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | homogentisate 12-dioxygenase |
Protein accession | YP_003408992 |
Protein GI | 284990438 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0204233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTCT ACCGGCAGGT GGGCGAGGTC CCACCCAAGC GGCACACCCA GTTCCGTCGT CCCGACGGCG GCCTGTACTC CGAGGAGCTG GTCGGTGAGG AGGGCTTCTC CTCGGACTCC GCTCTGCTCT ACCACCGTGG CGTGCCGTCG GCGATCGTCG ACGCCCGGCC GTGGGAGCTG CCCGACCAGA GCCTGACGCC GAACGCGCCG CTGGTGCCCC GGCACCTGAA GCTGCACGAC CTGTTCCCCG GCGAGGAGCA CAAGGCCGTC GACGCGGTGA CCGGCCGCCG GCTGGTGCTC GGCAACGGCG ACGTGCGCAT CTCCTACGCG GTCTCGTCGT TGCCGAGCCC GTACTACCGC AACGCCACCG GCGACGAGTG CGTCTACGTC GAGCGCGGCA CCGCCACGGT GGAGACGACG TTCGGCGCGC TGACCGTCGG CCGGGGCGAC TACGTGGTCA TCCCGCGGAC CACCACGCAC CGCTGGATCC CGACCGGGTC CGAGCCGCTG CGCACCTACG CGATCGAGGC CAACAGCCAC ATCGCCCCGC CCAAGCGCTA CCTGTCGAGG TACGGGCAGT TCCTCGAGCA CGCGCCGTAC TGCGAGCGGG ATCTCCGTGC CCCCGCCGAG CCGCTGCTGG TCGAGGGCAC CGACGTCGAG GTCTACGTCA AGCACCGCGG CAACGGCCCC GGCGGGCTGG CCGGCACGGT GCACGTGCTC CCGGAGCACC CGTTCGACGT GGTCGGCTGG GACGGGCACC TCTACCCCTA CGCGTTCAAC ATCGCCGACT ACGAGCCGAT CACCGGCCGG GTGCACCAGC CCCCGCCGGT CCACCAGGTC TTCGAGGGTC ACAACTTCGT GATCTGCAAC TTCGTGCCGC GGAAGGTCGA CTACCACCCA CTGGCCGTCC CGGTGCCCTA TTACCACTCC AACGTCGATT CCGACGAGAT CATGTTCTAC GTCGACGGCG ACTACGAGGC CCGCAAGGGG TCGGGCATCG GCAAGGGCTC GATCTCGGTG CACCCCGGCG GGCACTCCCA CGGCCCGCAG CCCGGCGCGG TGGAGCGCTC CCTGGGCGTG GAGTACTTCG ACGAGCTCGC CGTCATGGTC GACACCTTCC GCCCGCTGGA CCTGGGCGAG GCCGGCGTCG CCGTCGACGA CGGGAAGTAC GCCTGGACCT GGTCCGGACG AGGCCCGTCG GCGTGA
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Protein sequence | MAFYRQVGEV PPKRHTQFRR PDGGLYSEEL VGEEGFSSDS ALLYHRGVPS AIVDARPWEL PDQSLTPNAP LVPRHLKLHD LFPGEEHKAV DAVTGRRLVL GNGDVRISYA VSSLPSPYYR NATGDECVYV ERGTATVETT FGALTVGRGD YVVIPRTTTH RWIPTGSEPL RTYAIEANSH IAPPKRYLSR YGQFLEHAPY CERDLRAPAE PLLVEGTDVE VYVKHRGNGP GGLAGTVHVL PEHPFDVVGW DGHLYPYAFN IADYEPITGR VHQPPPVHQV FEGHNFVICN FVPRKVDYHP LAVPVPYYHS NVDSDEIMFY VDGDYEARKG SGIGKGSISV HPGGHSHGPQ PGAVERSLGV EYFDELAVMV DTFRPLDLGE AGVAVDDGKY AWTWSGRGPS A
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