Gene Gobs_1878 details

Gene Information

• Locus tag: Gobs_1878
• ID: 8753549
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: +
• Start bp: 1949390
• End bp: 1951423
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 71%
• Product: amino acid transporter
• Protein accession: YP_003408952
• Protein GI: 284990398

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.148156
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGACCC TGTCCGATCT CGGACAACTC CCGAAGCGTC TGGTCCTGGG CCGCCCCGTG 
CGCAGCGACC GGCTGGGGGA GTCCCTGCTG CCCAAGCGCC TGGCGCTGCC CATCTTCGCG 
AGCGACCCGC TGTCCTCCGT GGCCTACGCC ACGCAGGAGA TCCTCATCGT CCTGACGCTG 
GCCGGGACGG CGTTCCTCTA CCTGGCACCC TGGCTGGCGA TCGCCGTCGT CCTGCTGCTG 
GTGACGGTCG TCCTCTCCTA CCGGCAGGTG GTGCGCGCCT ACCCCTCCGG CGGCGGCGAC 
TACGAGGTCG CGATGAAGAA CCACGGGCAG TTCGCCGGGC TGACCGTGGC CAGCGCGCTG 
CTCGTGGACT ACGTGCTCAC CGTGGCGGTG TCGGTCGCGG CCGGCACCGA CAACATCATC 
TCGGCGTTCC CCGACCTGAA CGAGCACCGG GTGGCGATCG CCGTGGGGCT GGTGACGCTG 
CTGGCCGCGG CGAACCTGCG CGGGCTGCGC GAGTCGGGAC GGACGTTCGC CGTCCCGACC 
TACCTGTTCA TCTCCGGCAT CCTGGTGATG GTCGTCACCG GGCTGGTCCG GCACTTCTTC 
GGCGCCGGCC TCGACGCCGA GAGCGCCGGC TACTCGATCA CCCCCGAGCC CGGCTTCGAG 
CAGGTCACCG GTCTCGCGCT GGTCTTCTTC GTGCTGCGCG CCTTCGCCTC CGGGTGCACC 
GCCCTCACCG GCGTGGAGAC GATCGCCAAC GGCGTGCCCG CGTTCAAGCC GCCGAAGAGC 
CGCAACGCCG CCACGACGCT GGCGCTCATG GGCGGCATCG CCGCGATCAT GTTCTCCGGC 
GTCACCGCGC TGGCCCTCGC CGCCGACGTG AAGTACGCGG AGCACCCCTG CGACCTGGTC 
GGCTTCACCG GCTGCGAGAC CGAGCCGCAG CGGACGGTCA TCGCGCAGGT CGCCGCAGCG 
GTGTTCGGCG GGCCGACCTC GCCGGGCTTC TTCTACATTC AGGCGGCGAC CGCGCTCGTC 
CTCATCCTGG CCGCCAACAC CGCGTTCAAC GGCTTCCCGC TGCTGGGCTC GGTGCTCGCC 
CAGGACCGCT TCCTGCCCCG GCAGCTGCAC ACCCGCGGCG ACAAGCTGGT CTACAGCAAC 
GGCATCCTGC TGCTCGCCGG GTTCGCCGTG CTGCTCATCG CCGCCTTCGG CGCAGACGTC 
AACCGGCTGA TCCAGATGTA CATCGTGGGC GTGTTCACCA GCTTCTCCGT CGGCCAGTGG 
GGCATGGTCC GGCACTGGAA CCGGGAGCTG CGCTCGGAGA CCGACCCGCA GGCCCGGTCC 
CGCATCCGCC GGTCGCAGAC GATCAACGCC ATCGGCGGCA CCCTGACCAC CGTCGTGCTG 
CTGATCATCA TCGTCACGAA GTTCACCCGC GGCGCCTGGC TGGTCCTGCT GGTGATGCCG 
GTGCTCTTCC TGCTCATGCG GGCGATCAAC CGGCACTACT CGCACGTCGC CGAGCAGCTG 
GTCCCCGACA CCGACTCGCG GATGCTGCCC AGCAAGGTGC ACGCGGTCGT GCTGGTGTCC 
AAGGTGCACA AGCCGACCCT GCGGGCGCTG GCCTTCGCCC GGGCCACCCG GCCGGACCAC 
CTCACCGCGC TGACGGTCAA CGTCGACGAC GCCGAGACGC GGGCGCTGCA GACCCAGTGG 
GAGCGCTACG ACATCCCCGT GCCGTTGACC GTGCTGGAGT CCCCCTACCG CGAGATCACC 
CGGCCGGTGG TCGACTTCGT CAAGGGCATC CGCCGGGCCA GCCCGCGCGA GCTGGTCGTG 
GTGTTCGTGC CGCAGTACGT GGTGGGCCAC TGGTGGGAGA ACGTGCTGCA CAACCAGAGC 
GCGCTGCGGC TGCGCGCCCG GCTGCAGTTC CAGCCCGGCG TCATGATCAC CACGGTGCCC 
TGGCAGCTGG AGAGCTCCGT GGGCCGCGAC GACGACGGCC GCGGTGCCGG ACCAGCGCCG 
GGGGACCTGC GGCGCGGGAT CACCGACCCC TCGGAGGCGA GCCCCTATGG CTGA 

 

Protein sequence

MPTLSDLGQL PKRLVLGRPV RSDRLGESLL PKRLALPIFA SDPLSSVAYA TQEILIVLTL 
AGTAFLYLAP WLAIAVVLLL VTVVLSYRQV VRAYPSGGGD YEVAMKNHGQ FAGLTVASAL 
LVDYVLTVAV SVAAGTDNII SAFPDLNEHR VAIAVGLVTL LAAANLRGLR ESGRTFAVPT 
YLFISGILVM VVTGLVRHFF GAGLDAESAG YSITPEPGFE QVTGLALVFF VLRAFASGCT 
ALTGVETIAN GVPAFKPPKS RNAATTLALM GGIAAIMFSG VTALALAADV KYAEHPCDLV 
GFTGCETEPQ RTVIAQVAAA VFGGPTSPGF FYIQAATALV LILAANTAFN GFPLLGSVLA 
QDRFLPRQLH TRGDKLVYSN GILLLAGFAV LLIAAFGADV NRLIQMYIVG VFTSFSVGQW 
GMVRHWNREL RSETDPQARS RIRRSQTINA IGGTLTTVVL LIIIVTKFTR GAWLVLLVMP 
VLFLLMRAIN RHYSHVAEQL VPDTDSRMLP SKVHAVVLVS KVHKPTLRAL AFARATRPDH 
LTALTVNVDD AETRALQTQW ERYDIPVPLT VLESPYREIT RPVVDFVKGI RRASPRELVV 
VFVPQYVVGH WWENVLHNQS ALRLRARLQF QPGVMITTVP WQLESSVGRD DDGRGAGPAP 
GDLRRGITDP SEASPYG