Gene Gobs_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGobs_1864 
Symbol 
ID8753535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeodermatophilus obscurus DSM 43160 
KingdomBacteria 
Replicon accessionNC_013757 
Strand
Start bp1937884 
End bp1939173 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content71% 
IMG OID 
ProductRNA polymerase, sigma 70 subunit, RpoD subfamily 
Protein accessionYP_003408938 
Protein GI284990384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.123565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGCCG ACCAGCCAGC ACCGGCCAAG GCCCCCGCTC GCAAGCGGAC GGCCAAGAGC 
GCGGCGAAGC CCACCGCCGC CAAGGGCGCC CGCAAGCCCG CCATCACGCC GTCACCGGGC
GGCGGCGAGG GGGCCGTGCT CACCGCCGTG GCCTCCGAGA CCTCCACGGT CGCAGTGGTC
GACGCCGGCG GCGAGGGCCT GAAGCTCGAC GAGACGGTCG TCGCCACCCC TGACGGGGTC
GCCGAGGCCC CGACCGACTC CGAAGTGGCC GCCGCACCCG AGGAGGCCGC CGAGGGCGGC
GACTTCGAGT GGGACGACGA GGAGGAGTCC GAGGCCCTCC GTCAGGCCCG CAAGGACGCC
GAGCTCACCG CCTCGGCCGA CTCGGTCCGC GCCTACCTCA AGCAGATCGG CAAGGTCGCG
CTGCTCAACG CGGAGGAGGA GGTCGACCTC GCCAAGCGCA TCGAGGCCGG CCTCTACGGC
GCCGAGCGGC TGCGCCAGGC CGAGGAGGAG GGCCAGAAGC TCTCCCCGCA GATGCGCCGC
GACCTCAACT GGATCGTCCG CGACGGCGAG CGCGCCAAGA ACCACCTGCT GGAGGCTAAC
CTCCGCCTCG TGGTCTCCCT CGCCAAGCGC TACACCGGCC GCGGCATGGC GTTCCTGGAC
CTCATCCAGG AGGGCAACCT CGGCCTGATC CGCGCGGTCG AGAAGTTCGA CTACACCAAG
GGCTACAAGT TCTCCACGTA CGCCACCTGG TGGATCCGGC AGGCGATCAC CCGCGCCATG
GCCGACCAGG CCCGCACCAT CCGCATCCCC GTGCACATGG TCGAGGTCAT CAACAAGCTC
GGCCGCATCC AGCGCGAGCT GCTCCAGGAC CTCGGGCGCG AGCCCACCCC GGAGGAGCTC
GCCAAGGAGA TGGACATCAC CCCGGACAAG GTGCTGGAGA TCCAGCAGTA CGCCCGGGAG
CCGATCAGCC TCGACCAGAC CATCGGTGAC GAGGGCGACA GCCAGCTCGG CGACTTCATC
GAGGACTCCG AGGCGGTCGT CGCCGTCGAC GCGGTGAGCT TCACGCTCAT GCAGGACCAG
CTGACCAGCG TCCTGCAGAC GCTGTCGGAG CGGGAGGCCG GCGTCGTCCG GCTGCGCTTC
GGGCTCACCG ACGGCCAGCC GCGCACGCTC GACGAGATCG GCCAGGTCTA CGGGGTGACC
CGCGAGCGGA TCCGGCAGAT CGAGAGCAAG ACGATGTCGA AGCTGCGCCA CCCGAGCCGC
TCCCAGGTGC TGCGCGACTA CTTGGACTGA
 
Protein sequence
MPADQPAPAK APARKRTAKS AAKPTAAKGA RKPAITPSPG GGEGAVLTAV ASETSTVAVV 
DAGGEGLKLD ETVVATPDGV AEAPTDSEVA AAPEEAAEGG DFEWDDEEES EALRQARKDA
ELTASADSVR AYLKQIGKVA LLNAEEEVDL AKRIEAGLYG AERLRQAEEE GQKLSPQMRR
DLNWIVRDGE RAKNHLLEAN LRLVVSLAKR YTGRGMAFLD LIQEGNLGLI RAVEKFDYTK
GYKFSTYATW WIRQAITRAM ADQARTIRIP VHMVEVINKL GRIQRELLQD LGREPTPEEL
AKEMDITPDK VLEIQQYARE PISLDQTIGD EGDSQLGDFI EDSEAVVAVD AVSFTLMQDQ
LTSVLQTLSE REAGVVRLRF GLTDGQPRTL DEIGQVYGVT RERIRQIESK TMSKLRHPSR
SQVLRDYLD