| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1863 |
|---|
| Symbol | |
|---|
| ID | 8753534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 1936723 |
|---|
| End bp | 1937766 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003408937 |
|---|
| Protein GI | 284990383 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.831424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTCG ACCTCGCCGG CCTGCTGCCG TCCTGCGAGC TGCACTTGCG CGCCGAGCGC
AAGAGCCCCG AGACGGTGAA GTCCTACGGC GACGGGGTGC GCCGCTTCCT CGCCTGGGCC
GACGGCGAGG GCCGCCCCGC GGTGCTCGAC CGGGCCAGTG TGAATGCGTT CACCGCCGAG
CTGCTCGAGG GCGGCGCCGA ACCCGCCACC GCCCGCGCCC GCCAGCTGGC GCTGCGCCGG
TTCTCGGCCT GGCTGGTCGA GGAGGGCGAG GCCGACGCCG ACCCCCTGCT CGGACTCCGA
GCGCCCAAGC TGGACGCGAA GGTCGTCGAG CCGCTGACCG CCGAGCAGAT CAAGGCACTC
GTCGCTGCCT GCGCGGGCAG GGAGCTGCGC GACCGCCGGA ACGAGGCGCT CGTGCGGCTG
ATGATCGAGA CCGGTGCCCG GGCCGGAGAG GTCGTCGCGC TCGGCACCGA GGACGTCGAC
CTGTCCAACG GCACGGCCAC CGTGCGCCGC GGCAAGGGTG GTCGGGGCCG GGTGGTCCCC
TTCGGCCCGC AGACCTCCCG GGCGCTGGAC CGCTACCTCC GTGCCCGCCG CAGCCACCGG
CTGGCCGGCA CCCTGGCGCT GTGGCTCGGC GACCGCGGCA AGGCGTTCTC CTACGACGCA
CTGCACAAGA CGCTCGGCGA GCGGGCCCGC GCGGCCGGGA TCGAGGGGTT CCGGCCGCAC
CGGCTGCGGC ACACCGCGGC ACACCGCTGG CTCGCCGCGG GCGGCATCGA GGGCGGTCTC
ATGGCGGTGG CCGGCTGGAC GCGGCCGGAC ATGCTGCTGC GCTACACGCG CGCGCGCAGG
CGTCCGCCCG TGCCGCCGCC GAGGCTCGCG CCCTGGGGCT CGGCGACTTC TGACGGCGGC
GGGCAGCGGT CATCCGCTGA GGACCCGACG ACGTGCTTGG CGTCGGCCAG ATCACGAGAC
CGTGGGATGG CTACCTCGTC CGAGCCGCCG CCGTCAACCG AACGGGTCAG GCCGGCCACT
GGCCGTGCGA TGGGCCAAGA GTAG
|
|---|
| Protein sequence | MTVDLAGLLP SCELHLRAER KSPETVKSYG DGVRRFLAWA DGEGRPAVLD RASVNAFTAE
LLEGGAEPAT ARARQLALRR FSAWLVEEGE ADADPLLGLR APKLDAKVVE PLTAEQIKAL
VAACAGRELR DRRNEALVRL MIETGARAGE VVALGTEDVD LSNGTATVRR GKGGRGRVVP
FGPQTSRALD RYLRARRSHR LAGTLALWLG DRGKAFSYDA LHKTLGERAR AAGIEGFRPH
RLRHTAAHRW LAAGGIEGGL MAVAGWTRPD MLLRYTRARR RPPVPPPRLA PWGSATSDGG
GQRSSAEDPT TCLASARSRD RGMATSSEPP PSTERVRPAT GRAMGQE
|
|---|
| |