Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1836 |
Symbol | |
ID | 8753507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 1904409 |
End bp | 1906214 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_003408912 |
Protein GI | 284990358 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGATC GCGCCGACCG GAGGCTGCTG CTCACCAGTG CCCGGGCGCA CCTGCTGGAG GGCGCGGACC CGGCTCTGCG GGGCGTCCCG GGTCACGTGG CGGCGTCCTG GCGGCGCAGT GCCTCCTCCG GCGTGGACCC CGGCGAAGTC TCGAACGAGT ACTTCACCGA CCTCGACCTC GGCTCCCGGC TCATCCACTG TGCGCGGCCG GTGATCGAGC AGCTCGCCGA GGAGATCGCC GACGCGCCGA TGTGCGTCGC GCTGACCGAC AACGGGGCAC GCCTCCTGGT GCGCCGGGAC AGCGACGCCC AGATCGGCCG GGTCCTCGAC CACGTCCACT TCGCGCAGGG CTTCGGCTAC GCGGAGGGCA CGGTCGGGAC CAACGGGGTC GGCACGGTCC TGGAGTTCGG CGAGTCGGTG CACATCATCG GAGCCGAGCA CTTCGTCGAG CCGTTGCAGA CCTTCGCCTG CGCCGGGGCG CCGATCCGCG ACCCGTTCAC CGGGCGGATC GCTGGCGTGC TGGACATCAG CTGCCGCAGC CAGGACTCGA CTCCGCTCAT GCACTCCCTC GTGCGCACCT CGGCGGCGCG CATAGAGCGG AATTTGCTCA TGGACCGCGA CCAGACCCAG CAAGCACTGT TCGAGCTCTA CTCGCGGGTC GACGCGCGCA GCCGTGGAGC AGTCCTCGCC GTCGGGCAGC GGATGGTGAT GAGCAACGCG GCGATGCAGA CGCTGCTCGA CTTGGCCGAC CTGGAGGCCC TCCAGGACCA CATGCGGTTC GCGATGACCG GGCACGCCCG CCTTGACAAC CAGGTCGACC TGCCGTCCGG GACGCGGGTA CGGGTGCGCG GGTCGACGGT GGTCGTCGGC GGTGACATCG CCGGGGTCGT CGGCGTGGTC GGGGTGGTGC ACGAGCCCGA CGGGTTGAGC GCCACGGCGC TCGAGCGCCG GCCGGCTCCG CAGCTGCTAT CCGACACCGG ACGTGCTCGT GGCGGTCGCG TCGTGGCCAG CTCCAGCCCC GCATGGCGGG CGGCCGCGGC CACCGTCGAG CAGGCGCTGC GGGCCGGGCA GGCAGTCGTC GTCCTCGGCG AGCCCGGCAC GGGTCGGGCC ACCCTGCTGT CCGATCTGCA CCTCTCCCTG CACCCGGCCG GTTCCATCGT CTTCGTCGAG GCGGACGAGG TCGAGGCCGC TCCCCGGGAG GCGGCGGACC GGCTGCTACA GCCCGGTTCA GAGCCGGCGC TACACGTGCT GCGGGACGTT GACCGGCTGT CCCCGCGGAC GGCGCAGGCC CTCTTCGCCA GGCTGAGGAC GACTGCGCGG CCGCTCGAGC ACGTGGCCGC CACGGCGGTG CAGAGCGGCA CGGCGGAGGC CCCGCACGGC CCGCTGCTGG CGCTGTTCCG GGCGTCGACG TCGGTACCGC CGCTGCGCCA CCGGTCCGCG GACGTCCCCG CCCTCGTCCG GGCCCTGCTG GCCGAGCTGG CACCGTACCG CGAGGTCCGG CTGGACGGCG AGGCGATGCG GCTGGTGGTC CGCTACTGCT GGCCGGGCAA CGTGCGGCAA CTGCGGGAGG CGCTGGCGTC TGCGCTGCGC CTGCGTCCGG CCGGCTGCAT CCAGGCGCGA GACCTGCCCA CCTACTGCTC AAGCGTCCCG CGCAGCTCCC TCCGCCCCGT CGACGAGGCC GAACGCGACG CCATCGTCAC GGCGCTGCGT TGCGCCGGTG GAAACAAGGT CGCGGCGGCC ACCGCGCTCG GACTCGCGCG GTCGACGCTC TACCGCAAGA TCCGGCAATA CGGCATAAGC GACTGA
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Protein sequence | MLDRADRRLL LTSARAHLLE GADPALRGVP GHVAASWRRS ASSGVDPGEV SNEYFTDLDL GSRLIHCARP VIEQLAEEIA DAPMCVALTD NGARLLVRRD SDAQIGRVLD HVHFAQGFGY AEGTVGTNGV GTVLEFGESV HIIGAEHFVE PLQTFACAGA PIRDPFTGRI AGVLDISCRS QDSTPLMHSL VRTSAARIER NLLMDRDQTQ QALFELYSRV DARSRGAVLA VGQRMVMSNA AMQTLLDLAD LEALQDHMRF AMTGHARLDN QVDLPSGTRV RVRGSTVVVG GDIAGVVGVV GVVHEPDGLS ATALERRPAP QLLSDTGRAR GGRVVASSSP AWRAAAATVE QALRAGQAVV VLGEPGTGRA TLLSDLHLSL HPAGSIVFVE ADEVEAAPRE AADRLLQPGS EPALHVLRDV DRLSPRTAQA LFARLRTTAR PLEHVAATAV QSGTAEAPHG PLLALFRAST SVPPLRHRSA DVPALVRALL AELAPYREVR LDGEAMRLVV RYCWPGNVRQ LREALASALR LRPAGCIQAR DLPTYCSSVP RSSLRPVDEA ERDAIVTALR CAGGNKVAAA TALGLARSTL YRKIRQYGIS D
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