Gene Gobs_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGobs_1836 
Symbol 
ID8753507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeodermatophilus obscurus DSM 43160 
KingdomBacteria 
Replicon accessionNC_013757 
Strand
Start bp1904409 
End bp1906214 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content73% 
IMG OID 
ProductGAF modulated sigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_003408912 
Protein GI284990358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGATC GCGCCGACCG GAGGCTGCTG CTCACCAGTG CCCGGGCGCA CCTGCTGGAG 
GGCGCGGACC CGGCTCTGCG GGGCGTCCCG GGTCACGTGG CGGCGTCCTG GCGGCGCAGT
GCCTCCTCCG GCGTGGACCC CGGCGAAGTC TCGAACGAGT ACTTCACCGA CCTCGACCTC
GGCTCCCGGC TCATCCACTG TGCGCGGCCG GTGATCGAGC AGCTCGCCGA GGAGATCGCC
GACGCGCCGA TGTGCGTCGC GCTGACCGAC AACGGGGCAC GCCTCCTGGT GCGCCGGGAC
AGCGACGCCC AGATCGGCCG GGTCCTCGAC CACGTCCACT TCGCGCAGGG CTTCGGCTAC
GCGGAGGGCA CGGTCGGGAC CAACGGGGTC GGCACGGTCC TGGAGTTCGG CGAGTCGGTG
CACATCATCG GAGCCGAGCA CTTCGTCGAG CCGTTGCAGA CCTTCGCCTG CGCCGGGGCG
CCGATCCGCG ACCCGTTCAC CGGGCGGATC GCTGGCGTGC TGGACATCAG CTGCCGCAGC
CAGGACTCGA CTCCGCTCAT GCACTCCCTC GTGCGCACCT CGGCGGCGCG CATAGAGCGG
AATTTGCTCA TGGACCGCGA CCAGACCCAG CAAGCACTGT TCGAGCTCTA CTCGCGGGTC
GACGCGCGCA GCCGTGGAGC AGTCCTCGCC GTCGGGCAGC GGATGGTGAT GAGCAACGCG
GCGATGCAGA CGCTGCTCGA CTTGGCCGAC CTGGAGGCCC TCCAGGACCA CATGCGGTTC
GCGATGACCG GGCACGCCCG CCTTGACAAC CAGGTCGACC TGCCGTCCGG GACGCGGGTA
CGGGTGCGCG GGTCGACGGT GGTCGTCGGC GGTGACATCG CCGGGGTCGT CGGCGTGGTC
GGGGTGGTGC ACGAGCCCGA CGGGTTGAGC GCCACGGCGC TCGAGCGCCG GCCGGCTCCG
CAGCTGCTAT CCGACACCGG ACGTGCTCGT GGCGGTCGCG TCGTGGCCAG CTCCAGCCCC
GCATGGCGGG CGGCCGCGGC CACCGTCGAG CAGGCGCTGC GGGCCGGGCA GGCAGTCGTC
GTCCTCGGCG AGCCCGGCAC GGGTCGGGCC ACCCTGCTGT CCGATCTGCA CCTCTCCCTG
CACCCGGCCG GTTCCATCGT CTTCGTCGAG GCGGACGAGG TCGAGGCCGC TCCCCGGGAG
GCGGCGGACC GGCTGCTACA GCCCGGTTCA GAGCCGGCGC TACACGTGCT GCGGGACGTT
GACCGGCTGT CCCCGCGGAC GGCGCAGGCC CTCTTCGCCA GGCTGAGGAC GACTGCGCGG
CCGCTCGAGC ACGTGGCCGC CACGGCGGTG CAGAGCGGCA CGGCGGAGGC CCCGCACGGC
CCGCTGCTGG CGCTGTTCCG GGCGTCGACG TCGGTACCGC CGCTGCGCCA CCGGTCCGCG
GACGTCCCCG CCCTCGTCCG GGCCCTGCTG GCCGAGCTGG CACCGTACCG CGAGGTCCGG
CTGGACGGCG AGGCGATGCG GCTGGTGGTC CGCTACTGCT GGCCGGGCAA CGTGCGGCAA
CTGCGGGAGG CGCTGGCGTC TGCGCTGCGC CTGCGTCCGG CCGGCTGCAT CCAGGCGCGA
GACCTGCCCA CCTACTGCTC AAGCGTCCCG CGCAGCTCCC TCCGCCCCGT CGACGAGGCC
GAACGCGACG CCATCGTCAC GGCGCTGCGT TGCGCCGGTG GAAACAAGGT CGCGGCGGCC
ACCGCGCTCG GACTCGCGCG GTCGACGCTC TACCGCAAGA TCCGGCAATA CGGCATAAGC
GACTGA
 
Protein sequence
MLDRADRRLL LTSARAHLLE GADPALRGVP GHVAASWRRS ASSGVDPGEV SNEYFTDLDL 
GSRLIHCARP VIEQLAEEIA DAPMCVALTD NGARLLVRRD SDAQIGRVLD HVHFAQGFGY
AEGTVGTNGV GTVLEFGESV HIIGAEHFVE PLQTFACAGA PIRDPFTGRI AGVLDISCRS
QDSTPLMHSL VRTSAARIER NLLMDRDQTQ QALFELYSRV DARSRGAVLA VGQRMVMSNA
AMQTLLDLAD LEALQDHMRF AMTGHARLDN QVDLPSGTRV RVRGSTVVVG GDIAGVVGVV
GVVHEPDGLS ATALERRPAP QLLSDTGRAR GGRVVASSSP AWRAAAATVE QALRAGQAVV
VLGEPGTGRA TLLSDLHLSL HPAGSIVFVE ADEVEAAPRE AADRLLQPGS EPALHVLRDV
DRLSPRTAQA LFARLRTTAR PLEHVAATAV QSGTAEAPHG PLLALFRAST SVPPLRHRSA
DVPALVRALL AELAPYREVR LDGEAMRLVV RYCWPGNVRQ LREALASALR LRPAGCIQAR
DLPTYCSSVP RSSLRPVDEA ERDAIVTALR CAGGNKVAAA TALGLARSTL YRKIRQYGIS
D