| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1707 |
|---|
| Symbol | |
|---|
| ID | 8753378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 1767234 |
|---|
| End bp | 1768589 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | pyridoxal-phosphate dependent TrpB-like enzyme |
|---|
| Protein accession | YP_003408792 |
|---|
| Protein GI | 284990238 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGAGCA CCGACGTCCC GACCACCACG TCGGCGATGA CCAAGGCCGT GCTGGACGAG
GCGGACCTCC CCACGCACTG GTACAACCTG GCCGCCGACC TGCCCGCGCC GATGCCGCCC
CACCTGCACC CGGGGACCGG CGAGCCCCTC GCGGCCGGTG ACATGGCGCC GCTGTTCCCG
GCGGCGTTGA TCGAGCAGGA GATGACCGGC GAGCGTTTCG TGCCGATCCC GGAACCGGTC
CGCGAGGTCT ACCGGCTGTG GCGGCCCTCG CCGCTGTACC GGGCGCACCG CCTCGAGCGG
GCGCTGGGGA CGCCGGCGCG CATCTACTAC AAGTACGAGG GTGTCAGCCC GGTCGGCAGC
CACAAGCCGA ACACCGCCGT GGCGCAGGCG TACTACAACG CGGCCGAGGG CGTGCGCCGG
CTGACCACCG AGACCGGCGC CGGGCAGTGG GGCAGCGCGC TGTCGTTCGC CTCGGCGCTC
TTCGGCCTGG AGTGCGAGGT GTGGCAGGTC CGGGCCTCCT ACGACAGCAA GCCCTACCGG
CGGATGCTGA TGGAGACCTT CGGCGGCGTG GTCCACGCCA GCCCGTCGGA GCTGACCGAG
GCCGGCCGCG GCTTCCTGGA GCGGTTCCCC GGCACCACGG GCAGCCTCGG GATGGCGGTC
AGCGAGGCGG TGGAGTCGGC GGCGCCGGAC CCGGAGGCGC GGTACGCGCT GGGCAGCGTG
CTCAACCACG TGCTGCTGCA CCAGACGGTG ATCGGCGAGG AGGCGTTGCG GCAGCTCGAG
GTGTTCGGCG AGACGGCGGC CGACGTCGTC TACGGGTGTG CCGGTGGCGG GTCGAACCTG
GCGGGGCTGT CCTTCCCGTT CCTGCGGGAG AAGCTGGCCG GGCGCACCGG CACGCGGGTG
GTGGCCGTGG AACCCGCCGC TTGCCCGTCG CTCACGCAGG GGCGCTACGA GTACGACCAC
GGCGACGTCG CAGGGCTGAC CCCGCTGATG AAGATGCACA CCCTCGGGCG CGACTTCGTG
CCCGAGGCCA TCCACGCCGG TGGGCTGCGC TACCACGGCA TGGCCCCGAT GGTCAGCCAC
GTCGTGGACC TGGGCCTGAT CACCGCCCAG GCCGTCGAGC AGCGCGAGGC GTTCGACGCC
GGACTGCTGT TCGCCCGCAC CGAGGGGCTG GTGCCGGCGC CGGAGTCCTG CCACGCCGTC
GCCGGCGCGA TCGCCGAGGC CCGCCGCCGC GCGGACACCG GGGAGACCGG CGTCCTGGTG
GTGGGCCTGT CCGGCAACGG CCAGCTGGAC CTGCCCGCCT ACGCCGAGCA CCTCACCGGC
GTGCGCACCC CGGCGACGGG CGACCAGCCC TTCTGA
|
|---|
| Protein sequence | MTSTDVPTTT SAMTKAVLDE ADLPTHWYNL AADLPAPMPP HLHPGTGEPL AAGDMAPLFP
AALIEQEMTG ERFVPIPEPV REVYRLWRPS PLYRAHRLER ALGTPARIYY KYEGVSPVGS
HKPNTAVAQA YYNAAEGVRR LTTETGAGQW GSALSFASAL FGLECEVWQV RASYDSKPYR
RMLMETFGGV VHASPSELTE AGRGFLERFP GTTGSLGMAV SEAVESAAPD PEARYALGSV
LNHVLLHQTV IGEEALRQLE VFGETAADVV YGCAGGGSNL AGLSFPFLRE KLAGRTGTRV
VAVEPAACPS LTQGRYEYDH GDVAGLTPLM KMHTLGRDFV PEAIHAGGLR YHGMAPMVSH
VVDLGLITAQ AVEQREAFDA GLLFARTEGL VPAPESCHAV AGAIAEARRR ADTGETGVLV
VGLSGNGQLD LPAYAEHLTG VRTPATGDQP F
|
|---|
| |