Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1653 |
Symbol | |
ID | 8753323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 1712796 |
End bp | 1714628 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003408740 |
Protein GI | 284990186 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0487091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGCCC AGTACGCCAC CACGCTGACC TTCATCGCCC TCGGGGCGAT CTTCGCCTAC TCGTTCTACG CCGTCCTGAT CGCCGGGCAG TTGAGTCTCG GTCAGGCCGG GTTCGCCTCC GTGGCGGCCT TCTCGGCCGC CACCCTCGCG CCCAGCGGGG ACGACGTCGG CGACGTGCCC GCCCTGCTGA CCGCCGTCGT CATCGGCATG GCCGTCGGCG CCGTCGCCTC CGTGGTGCTG GGCCTGCCGA CGATGCACCT GCGGGGGGTC TTCCTCGCCA TCGCCACGCT CGGGTTCGCC GAGGCGGTGC GGGTCGTGCT GCTCAACCAG GAGTGGACCG GCGGCGCGCA GGGGCTCGCG GTGCCACGCA TCCTCACCGT CGGGATGGCC TGGACGGCGC TGGCCGTCGT CGCGTACTGG TTCTGGCGGA TGGGCCGCTC CCGGTACGGC CGGGCGCTCG AGGCCATCCG GGAGGACGAG CTCGCCGCCC GGTCCATGGG CATCGACGTG GGCCGCCACC GGCTCGCCGC CTTCGTCACC TCCGGCGCCG TGGCCGGGCT GTACGGCGTG CTGTTCGCCT ACTACGTCCG GCTCATCGCA CCCAGCGACT TCGACTTCAC CGCGGCCGTG GACGGCCTGG TCACCGCCGT GGTCGGCGGC TCCACCATGT TCCTCGGCCC GATCCTGGGC AGCGGGTTCC AGACGATGAT CCCCGAGATC CAGCGGGCGG TCGGGGTGGA GGCGGGCTGG ATCCGCCCCT TCCTCGCCGG CCTGCTGCTG CTCGTGGTGA TCCTCTTCCT GCCGGGCGGG CTGACCAGCC TGATCCCGCG GCGCACCCGC GTCCCGTCCT CGTCGGGGGG CCCGGGCAGT GCCGCCGACC CCGCGCCGCG GCTGGCCGCT CGCGCGCACC CGGCCGCCGG GGAGACGGTG GTCAGCCTGA CCGGCCTGGC CAAGGAGTAC GGCGGGGTGC ACGCCGTCCG GGGCGTCGAC CTGGAGATCC GCAGCGGCGA GGTCGTGGGT CTGATCGGTC CGAACGGTGC GGGCAAGACC ACCCTGGTGA ACATGATCAG CGGCCTGGTG CCGCCCAGCT CGGGCAGCGC CACGGTGCTC GGGACGACGA TCGGGCGGAC CCCGGTGCAC CGCGTGGCGG CGGCCGGGGT GAGCCGGACC TTCCAGCACT CCAAGCTGTT CAACCGGCTG TCGGCGCTGG AGAACGTGCT CGTGGGCGCA CACCTGGTCA GCCGACCGAC CTTCCTGCGC CGCCTGCTGT GGCTGCCCTC GGCCCGGCGC GACGAGCGGG CGGCCCTCGA GCACGCGGCC CGCTGCCTCC GGCGGGTGGG GCTCGGCGAC CTGGCGGGCA ACCGGGCGTC GTCGCTGTCC TACGGCGACC AGCGCCGGCT GGAGATCGCC CGCGCGCTCG CCGCGGAACC CTCGCTGCTC ATCCTCGACG AGCCGGCGGC CGGCATGAAC CACGTCGAGG CCGCGCAGCT GTCCGAGCTC ATCCGGTCGC TGGCGCAGGG CGGGCTGACG ATCCTGTTCA TCGAGCACAA CGTCGGCATG GTCCTGGAGA CCTGCACCCG GGTCGTCGTC CTCGACTTCG GCGAGGTCAT CGCCAGCGGG ACGCCGGCGG AGATCGCCGC CGACCCGGCC GTGATCGAGG CCTACCTTGG CACGGCGGAC GACGACCCGG GCGGGAGCTC GGTCGCCGAC GGGACCCTGG CCGACCCGAC CGGGGGCAGC GGCGCCCCCA CGCCCGACGC CGTCACCAAC GTGGACCCGA GCGCGGCCGG CACGCTCGAC ATCCCGGACA CCACCCCGAG GAACGCGACG TGA
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Protein sequence | MLAQYATTLT FIALGAIFAY SFYAVLIAGQ LSLGQAGFAS VAAFSAATLA PSGDDVGDVP ALLTAVVIGM AVGAVASVVL GLPTMHLRGV FLAIATLGFA EAVRVVLLNQ EWTGGAQGLA VPRILTVGMA WTALAVVAYW FWRMGRSRYG RALEAIREDE LAARSMGIDV GRHRLAAFVT SGAVAGLYGV LFAYYVRLIA PSDFDFTAAV DGLVTAVVGG STMFLGPILG SGFQTMIPEI QRAVGVEAGW IRPFLAGLLL LVVILFLPGG LTSLIPRRTR VPSSSGGPGS AADPAPRLAA RAHPAAGETV VSLTGLAKEY GGVHAVRGVD LEIRSGEVVG LIGPNGAGKT TLVNMISGLV PPSSGSATVL GTTIGRTPVH RVAAAGVSRT FQHSKLFNRL SALENVLVGA HLVSRPTFLR RLLWLPSARR DERAALEHAA RCLRRVGLGD LAGNRASSLS YGDQRRLEIA RALAAEPSLL ILDEPAAGMN HVEAAQLSEL IRSLAQGGLT ILFIEHNVGM VLETCTRVVV LDFGEVIASG TPAEIAADPA VIEAYLGTAD DDPGGSSVAD GTLADPTGGS GAPTPDAVTN VDPSAAGTLD IPDTTPRNAT
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