| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1636 |
|---|
| Symbol | |
|---|
| ID | 8753306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 1696163 |
|---|
| End bp | 1697383 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | oxygen-independent coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_003408724 |
|---|
| Protein GI | 284990170 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.234243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG TCCTGCCGCT GCTCGAGGCC CCGCCGCGGA CCCTGCAGCT CCCTGACTCC
GCCCGCGAGG GGCTGGCTCG CACCCCCTTC GGGCTCTACG TCCACGTGCC GTTCTGCGCC
ACCCGCTGCG GCTACTGCGA CTTCAACACC TACACCGCCG ACGAGCTGGG GCCCGGCGCC
AGCCGCGCCG AGTACGCCGG CACCGCGATC GCCGAGCTGC GGCAGGCCGC CGAGACCCTG
GGCCCGGACC TGCCGACCGT CTCGACCGTC TTCGTGGGCG GCGGCACGCC CACGCTGCTG
GCGGCCGACG ACCTCGCCGC CGTCCTCGCC GAGGTGCGCC GGCTGTTCCC GGTCACCCCC
GGCGTCGAGG TCACCACCGA GGCCAACCCC GAGACGGTGA CCCCGGCGTC CTTGGCCACG
CTGCGCGCGG CCGGCTTCAC CCGGATCAGC CTGGGCATGC AGTCCGCTGC CGAGCACGTG
CTCGCCGTCC TCGACCGGCG GCACACGCCG GGCCGCGCCG TCGAGGCGGC CCGCGAGGCC
CGCGCGGCCG GCTTCGAGCA CGTCAACCTC GACCTGATCT ACGGGACGCC GGGGGAGACC
GACGCCGACT GGTCCGCCTC GCTCGACGCC GTCCTCGCCG CTCCGGTCGA CCACGTCAGC
GCCTACGCCC TCATCGTCGA GGAGGGCACC CGGCTGGCGC GCCGCATCGA CCGCGGCGAG
CTGCCCATGC CGGACGACGA CGTCCTCGCC GACCGCTACG AGCAGGCCGA CGCCACCCTG
CGCGCCGCCG GCTTCGACTG GTACGAGGTC TCCAACTGGG CCCGCGGCGA GGCGGCCCGC
TGCCGGCACA ACGAGTTGTA CTGGGCCAAC GCCAACTGGT GGGGCGTCGG GCCGGGCGCG
CACAGCCACG TCGGCGGGCT GCGCTGGTGG AACGTCAAGC ACCCCGCCGC GTACGCCGGC
CGGCTGCTGC GGGGAGAGAG CCCGGTGCAG GACACCGAGC TGCTGGACGA CGACGACCGC
GCGCTGGAGA CGGTGATGCT CGGCCTGCGG CTGCGCGAGG GGCTGCCGCT GACCGCGCTG
TCGGAGGTCG GTCGGGCCCG CGCCGCCCGC GCCGTCGTCC GCGGGCTGCT CGAGCCGGGT
GCGCACGCCG CCGGCCGCGC CGTCCTCACC GACCGCGGCC GCCTGCTCGC CGACGCCCTC
GTCCGGGACC TGACCGATTA G
|
|---|
| Protein sequence | MNTVLPLLEA PPRTLQLPDS AREGLARTPF GLYVHVPFCA TRCGYCDFNT YTADELGPGA
SRAEYAGTAI AELRQAAETL GPDLPTVSTV FVGGGTPTLL AADDLAAVLA EVRRLFPVTP
GVEVTTEANP ETVTPASLAT LRAAGFTRIS LGMQSAAEHV LAVLDRRHTP GRAVEAAREA
RAAGFEHVNL DLIYGTPGET DADWSASLDA VLAAPVDHVS AYALIVEEGT RLARRIDRGE
LPMPDDDVLA DRYEQADATL RAAGFDWYEV SNWARGEAAR CRHNELYWAN ANWWGVGPGA
HSHVGGLRWW NVKHPAAYAG RLLRGESPVQ DTELLDDDDR ALETVMLGLR LREGLPLTAL
SEVGRARAAR AVVRGLLEPG AHAAGRAVLT DRGRLLADAL VRDLTD
|
|---|
| |