Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1522 |
Symbol | |
ID | 8753190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 1576730 |
End bp | 1578400 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003408619 |
Protein GI | 284990065 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.256666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCTCAGT ACATCTACAC GATGGTGCGT ACGCGCAAGG CGCACGGCGA CAAGGTGATC CTGGACGACG TCACCCTGTC GTTCCTGCCC GGCGCCAAGA TCGGCGTCGT CGGCCCGAAC GGCGCCGGCA AGTCGACCGT CCTCCAGATC ATGGCCGGCA TGCAGCAGCC CTCCAACGGC GACGTCATGC TGGCGCCGGG TGCCTCGGTC GGCATCCTGC TGCAGGAGCC GCCGCTGAAC GAGGAGCTCG ACGTCCGCGG CAACGTGGAG GAGGCCGTCA AGCCGCTCCG CGACGCGCTG ACCCGCTTCG AGGAGGTCAG CGCGGCGATG GGCGAGCCCG ACGCCGACTT CGACACGCTG CTGGCCGAGC AGGGCGAGCT CATGGAGGTC ATCGAGCAGC ACGACGGCTG GGAGCTCGAC GCGCGCATCG AGCAGGCCAT GGACGCGCTG CGCTGCCCGC CCGGCGACGC CGACGTCACG GTGCTGTCCG GCGGTGAGCG CCGCCGCGTC GCGCTGTGCA AGCTGCTGCT CGAGGCGCCG GACCTGCTGC TGCTCGACGA GCCCACCAAC CACCTCGACG CGGAGAGCGT CGCCTGGCTG GAGCAGCACC TGGAGAAGTA CGCCGGCACC GTCGTGGCCG TCACCCACGA CCGGTACTTC CTCGACAACG TCGCCCAGTG GATCCTCGAG CTCGACCGCG GCCGGGCCTA CCCCTACGAG GGCAACTACT CCACCTACCT GGAGACCAAG GCCGCCCGCC TCAAGGTCGA GGGCGCCAAG GACGCCAAGC GGCAGAAGCG GCTGGCCGAG GAGCTCGAGT GGGTGCGGTC GGGCGCCAAG GCCCGCCAGG CCAAGAGCAA GGCCCGCCTG CAGCGCTACG AGGAGATGGC TGCCGAGGCC GAGAAGTACC GCAAGCTGGA CTTCGAGGAG ATCCAGATCC CGCCGGGCCC GCGGCTGGGC AACGTGGTCG TCGAGACCAG CGACCTCACC AAGGGCTTCG GCGACCGCGT GCTGATCGAC GACCTGTCCT TCACGCTGCC CCGCAACGGC ATCGTCGGCG TCGTCGGCCC CAACGGTGCC GGCAAGACCA CGCTGTTCAA GATGCTGGTC GGCGAGGAGA AGCCGGACGA CGGCGAGATC AAGGTCGGTG AGACGGTCAA GGTCTCCTAC GTCGAGCAGA GCCGCGCCGG GATCGACCCC AAGAAGACGC TGTGGCACGT CGTCTCCGAC GGCCTCGACC ACATCAAGGT CGGCAACGTG GAGATGCCCT CGCGGGCCTA CGTCGCCGCG TTCGGGTTCA AGGGCCCGGA CCAGCAGAAG CCGGCCGGCG TGCTGTCCGG CGGTGAGCGC AACCGCCTCA ACCTCGCCCT GACCCTCAAG CAGGGCGGCA ACCTGCTGCT GCTCGACGAG CCGACCAACG ACCTGGACGT CGAGACGCTG ACCAGCTTGG AGTCCGCGCT GCTGGAGTTC CCGGGCTGCG CCGTCGTGGT CAGCCACGAC CGCTGGTTCC TCGACCGCGT GGCGACGCAC ATCCTCGCCT ACGAGGGCGA TTCCAGGTGG TTCTGGTTCG AGGGCAACTT CGCCGACTAC GAGAAGAACA AGGTCGAGCG GCTCGGTCCG GAGGCGGCCC GGCCGCACCG TGCCACCTAC CGGAAGCTCG CGCGCGACTG A
|
Protein sequence | MAQYIYTMVR TRKAHGDKVI LDDVTLSFLP GAKIGVVGPN GAGKSTVLQI MAGMQQPSNG DVMLAPGASV GILLQEPPLN EELDVRGNVE EAVKPLRDAL TRFEEVSAAM GEPDADFDTL LAEQGELMEV IEQHDGWELD ARIEQAMDAL RCPPGDADVT VLSGGERRRV ALCKLLLEAP DLLLLDEPTN HLDAESVAWL EQHLEKYAGT VVAVTHDRYF LDNVAQWILE LDRGRAYPYE GNYSTYLETK AARLKVEGAK DAKRQKRLAE ELEWVRSGAK ARQAKSKARL QRYEEMAAEA EKYRKLDFEE IQIPPGPRLG NVVVETSDLT KGFGDRVLID DLSFTLPRNG IVGVVGPNGA GKTTLFKMLV GEEKPDDGEI KVGETVKVSY VEQSRAGIDP KKTLWHVVSD GLDHIKVGNV EMPSRAYVAA FGFKGPDQQK PAGVLSGGER NRLNLALTLK QGGNLLLLDE PTNDLDVETL TSLESALLEF PGCAVVVSHD RWFLDRVATH ILAYEGDSRW FWFEGNFADY EKNKVERLGP EAARPHRATY RKLARD
|
| |