Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1449 |
Symbol | |
ID | 8753114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 1496619 |
End bp | 1497905 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | type III effector Hrp-dependent outers |
Protein accession | YP_003408550 |
Protein GI | 284989996 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGACA TCGGGTTCCT CGCCGACGAC CTGACCGGCG CCAGCGACGT CCTCGCGCAG GCGCACGCCC AGGGGCTCGA CGCCATGCTG GTCCTCGACC CCGGACGGTC GACGCCGGAC GACGCCGACG TCGTGGGCAT CGCCGGACCG GCCCGCTCGC TGGCCGGCGA CGCACTCGAC GAGGCGGTGC GGTCCGGCCT CGCCCCGCTG GCGTCCCTGG ACCTGTCCGT GCTGCTCTAC AAGGTCTGCT CCACGTTCGA CTCCTCGCCC ACCGTCGGCA GCATCGGGCG GGGGATCGAG CTCCTGCACG AGCGGTTCCC CGGACACGGA CCGGTGCCCG TCGTCCCCGC GCAGCCCGGC TTCGGTCGCT ACACCGCCTT CAGCCAGCAC TTCGGCGCCT ACGCAGGCGA GGTGTACCGG CTGGACCGGC ACCCCGTGAT GGCCCGCCAC CCGTCCACGC CGATGCACGA GGCCGACCTG CGGCTGGTCC TGGCCGAACA GCTCGCGAGC CGGCGCCCCG TCCCGGGCCT GCAGCTGCCG GCCCACGCCG ACGGCACCTT CGACGACCGG TGGGCGCAAC TGCGCGAGGC GGCCGACACC GAGGCCTTCG TCGTGGACGC CGTGGACGAG GCGCAGATGG ACACCGTCGC CAAGGCCCTG CTCCGGGACC CGCGTCCCGC CGGACCGGCG CTCGTCGTCG GTTCCGGAGG CATCATGGCC GCGCTGGCCC GCCTCCGTGG CGGCGCCCCC CGCAGGCCGC CGGCTCCCAC CGCCTCCCGT GGCCCGACGC TCGTCGTGTC GGCGTCCGCG TCAACCACGA CCGCCGGCCA GATCGCCGAC GCGGTCGGGC ACGGCTGGGT CGACGTCCCG ATCCCGGCCG GGGACTTCGC CGGCGACGTC ACTGGGAGGC CGTGGTCGGC CGCCGTCGAG GCGGCACTCC GGGCCGGCCG GAACGTCGTC GCCCACACCA CGCGGGGTCC CGACGACCCC CGGCTGAGCG CCGGCTCCCC CACCGCCGCC GCGGTGGGCG GGACCATCGG CCGGCTCGCC GGCGACCTGG CCCGCCGGGG ACTGACCCGG GACGTCGTCG TCTGCGGCGG CGACACCTCC AGCCACGCCC TGCTGGCCAT GGGGGTCGGC GAGCTACGGG TCAACGAGCA GTTCGTCACC GCCGGACCCA TCTGCACCAC CGATGACGCG GCGGCCGTCG CCGGCTGCCG CGTGCTGCTC AAGGGCGGTC AGGTCGGCCC CCCCGACCTG TTCCGCCGCT TCGCCGGCCT CGTCTGA
|
Protein sequence | MADIGFLADD LTGASDVLAQ AHAQGLDAML VLDPGRSTPD DADVVGIAGP ARSLAGDALD EAVRSGLAPL ASLDLSVLLY KVCSTFDSSP TVGSIGRGIE LLHERFPGHG PVPVVPAQPG FGRYTAFSQH FGAYAGEVYR LDRHPVMARH PSTPMHEADL RLVLAEQLAS RRPVPGLQLP AHADGTFDDR WAQLREAADT EAFVVDAVDE AQMDTVAKAL LRDPRPAGPA LVVGSGGIMA ALARLRGGAP RRPPAPTASR GPTLVVSASA STTTAGQIAD AVGHGWVDVP IPAGDFAGDV TGRPWSAAVE AALRAGRNVV AHTTRGPDDP RLSAGSPTAA AVGGTIGRLA GDLARRGLTR DVVVCGGDTS SHALLAMGVG ELRVNEQFVT AGPICTTDDA AAVAGCRVLL KGGQVGPPDL FRRFAGLV
|
| |